Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA11Q9Y5H2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA11Q9Y5H2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHGA11Q9Y5H2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.72■□□□□ 0.91
PCDHGA11Q9Y5H2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.72■□□□□ 0.91
PCDHGA11Q9Y5H2 PBX2P1-201ENST00000493219 1291 ntBASIC20.72■□□□□ 0.91
PCDHGA11Q9Y5H2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHGA11Q9Y5H2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHGA11Q9Y5H2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA11Q9Y5H2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA11Q9Y5H2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA11Q9Y5H2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA11Q9Y5H2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHGA11Q9Y5H2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA11Q9Y5H2 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.71■□□□□ 0.91
PCDHGA11Q9Y5H2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA11Q9Y5H2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA11Q9Y5H2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA11Q9Y5H2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PCDHGA11Q9Y5H2 AC010542.4-201ENST00000563151 1910 ntBASIC20.71■□□□□ 0.91
PCDHGA11Q9Y5H2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA11Q9Y5H2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA11Q9Y5H2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA11Q9Y5H2 AL034346.1-201ENST00000568244 1277 ntBASIC20.71■□□□□ 0.91
PCDHGA11Q9Y5H2 AC106739.1-201ENST00000617035 715 ntBASIC20.71■□□□□ 0.91
PCDHGA11Q9Y5H2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA11Q9Y5H2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHGA11Q9Y5H2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA11Q9Y5H2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA11Q9Y5H2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA11Q9Y5H2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHGA11Q9Y5H2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHGA11Q9Y5H2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.7■□□□□ 0.9
PCDHGA11Q9Y5H2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA11Q9Y5H2 AC126544.1-201ENST00000580842 1059 ntBASIC20.7■□□□□ 0.9
PCDHGA11Q9Y5H2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.7■□□□□ 0.9
PCDHGA11Q9Y5H2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA11Q9Y5H2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA11Q9Y5H2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA11Q9Y5H2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA11Q9Y5H2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PCDHGA11Q9Y5H2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA11Q9Y5H2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA11Q9Y5H2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA11Q9Y5H2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHGA11Q9Y5H2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA11Q9Y5H2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.69■□□□□ 0.9
PCDHGA11Q9Y5H2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.69■□□□□ 0.9
PCDHGA11Q9Y5H2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA11Q9Y5H2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHGA11Q9Y5H2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHGA11Q9Y5H2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PCDHGA11Q9Y5H2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA11Q9Y5H2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PCDHGA11Q9Y5H2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA11Q9Y5H2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PCDHGA11Q9Y5H2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA11Q9Y5H2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA11Q9Y5H2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA11Q9Y5H2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PCDHGA11Q9Y5H2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA11Q9Y5H2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
PCDHGA11Q9Y5H2 EDA-201ENST00000338901 1233 ntBASIC20.68■□□□□ 0.9
PCDHGA11Q9Y5H2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PCDHGA11Q9Y5H2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHGA11Q9Y5H2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA11Q9Y5H2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHGA11Q9Y5H2 AC026310.3-201ENST00000625186 2373 ntBASIC20.68■□□□□ 0.9
PCDHGA11Q9Y5H2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PCDHGA11Q9Y5H2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA11Q9Y5H2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHGA11Q9Y5H2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA11Q9Y5H2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHGA11Q9Y5H2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA11Q9Y5H2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA11Q9Y5H2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA11Q9Y5H2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA11Q9Y5H2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PCDHGA11Q9Y5H2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHGA11Q9Y5H2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
PCDHGA11Q9Y5H2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.67■□□□□ 0.9
PCDHGA11Q9Y5H2 AC027682.1-201ENST00000562846 899 ntBASIC20.67■□□□□ 0.9
PCDHGA11Q9Y5H2 AC133561.4-201ENST00000566112 224 ntBASIC20.67■□□□□ 0.9
PCDHGA11Q9Y5H2 AC008764.7-201ENST00000593779 1081 ntBASIC20.67■□□□□ 0.9
PCDHGA11Q9Y5H2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA11Q9Y5H2 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHGA11Q9Y5H2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA11Q9Y5H2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA11Q9Y5H2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA11Q9Y5H2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA11Q9Y5H2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
PCDHGA11Q9Y5H2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA11Q9Y5H2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA11Q9Y5H2 IGHV3-19-201ENST00000521488 291 ntBASIC20.66■□□□□ 0.9
PCDHGA11Q9Y5H2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHGA11Q9Y5H2 AC110285.6-201ENST00000617652 491 ntBASIC20.66■□□□□ 0.9
PCDHGA11Q9Y5H2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PCDHGA11Q9Y5H2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
PCDHGA11Q9Y5H2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA11Q9Y5H2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms