Protein–RNA interactions for Protein: Q9UHX1

PUF60, Poly(U)-binding-splicing factor PUF60, humanhuman

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60Q9UHX1 AP005435.1-201ENST00000529293 1178 ntBASIC23.86■■□□□ 1.41
PUF60Q9UHX1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.86■■□□□ 1.41
PUF60Q9UHX1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
PUF60Q9UHX1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.86■■□□□ 1.41
PUF60Q9UHX1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PUF60Q9UHX1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PUF60Q9UHX1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.85■■□□□ 1.41
PUF60Q9UHX1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.85■■□□□ 1.41
PUF60Q9UHX1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.85■■□□□ 1.41
PUF60Q9UHX1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
PUF60Q9UHX1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PUF60Q9UHX1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PUF60Q9UHX1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PUF60Q9UHX1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PUF60Q9UHX1 AC010525.1-201ENST00000585559 441 ntBASIC23.85■■□□□ 1.41
PUF60Q9UHX1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PUF60Q9UHX1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.85■■□□□ 1.41
PUF60Q9UHX1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.84■■□□□ 1.41
PUF60Q9UHX1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PUF60Q9UHX1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.84■■□□□ 1.41
PUF60Q9UHX1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PUF60Q9UHX1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.84■■□□□ 1.41
PUF60Q9UHX1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PUF60Q9UHX1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
PUF60Q9UHX1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
PUF60Q9UHX1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
PUF60Q9UHX1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.84■■□□□ 1.41
PUF60Q9UHX1 TERF1P2-201ENST00000583350 1212 ntBASIC23.84■■□□□ 1.41
PUF60Q9UHX1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.84■■□□□ 1.41
PUF60Q9UHX1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
PUF60Q9UHX1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PUF60Q9UHX1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PUF60Q9UHX1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.84■■□□□ 1.41
PUF60Q9UHX1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
PUF60Q9UHX1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.83■■□□□ 1.41
PUF60Q9UHX1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.83■■□□□ 1.41
PUF60Q9UHX1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PUF60Q9UHX1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PUF60Q9UHX1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.83■■□□□ 1.41
PUF60Q9UHX1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
PUF60Q9UHX1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.83■■□□□ 1.41
PUF60Q9UHX1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.83■■□□□ 1.41
PUF60Q9UHX1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.82■■□□□ 1.4
PUF60Q9UHX1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.82■■□□□ 1.4
PUF60Q9UHX1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PUF60Q9UHX1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
PUF60Q9UHX1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PUF60Q9UHX1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PUF60Q9UHX1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PUF60Q9UHX1 ESRRAP2-201ENST00000418437 1549 ntBASIC23.82■■□□□ 1.4
PUF60Q9UHX1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.82■■□□□ 1.4
PUF60Q9UHX1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
PUF60Q9UHX1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PUF60Q9UHX1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.81■■□□□ 1.4
PUF60Q9UHX1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
PUF60Q9UHX1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.81■■□□□ 1.4
PUF60Q9UHX1 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.81■■□□□ 1.4
PUF60Q9UHX1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.81■■□□□ 1.4
PUF60Q9UHX1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PUF60Q9UHX1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
PUF60Q9UHX1 LINC01529-204ENST00000636474 1715 ntBASIC23.81■■□□□ 1.4
PUF60Q9UHX1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PUF60Q9UHX1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PUF60Q9UHX1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PUF60Q9UHX1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PUF60Q9UHX1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.8■■□□□ 1.4
PUF60Q9UHX1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PUF60Q9UHX1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PUF60Q9UHX1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
PUF60Q9UHX1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PUF60Q9UHX1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.8■■□□□ 1.4
PUF60Q9UHX1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PUF60Q9UHX1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
PUF60Q9UHX1 AC105233.4-201ENST00000642045 216 ntBASIC23.8■■□□□ 1.4
PUF60Q9UHX1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
PUF60Q9UHX1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PUF60Q9UHX1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.8■■□□□ 1.4
PUF60Q9UHX1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PUF60Q9UHX1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PUF60Q9UHX1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
PUF60Q9UHX1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
PUF60Q9UHX1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.79■■□□□ 1.4
PUF60Q9UHX1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.79■■□□□ 1.4
PUF60Q9UHX1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.79■■□□□ 1.4
PUF60Q9UHX1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.79■■□□□ 1.4
PUF60Q9UHX1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PUF60Q9UHX1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PUF60Q9UHX1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PUF60Q9UHX1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PUF60Q9UHX1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PUF60Q9UHX1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PUF60Q9UHX1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
PUF60Q9UHX1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PUF60Q9UHX1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.78■■□□□ 1.4
PUF60Q9UHX1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PUF60Q9UHX1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PUF60Q9UHX1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PUF60Q9UHX1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
PUF60Q9UHX1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
PUF60Q9UHX1 ID1-201ENST00000376105 1233 ntBASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms