Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 ECEL1P1-201ENST00000373592 1742 ntBASIC21.08■□□□□ 0.97
POLR1BQ9H9Y6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
POLR1BQ9H9Y6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
POLR1BQ9H9Y6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.08■□□□□ 0.97
POLR1BQ9H9Y6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
POLR1BQ9H9Y6 BID-214ENST00000617586 542 ntTSL 5 BASIC21.08■□□□□ 0.97
POLR1BQ9H9Y6 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.08■□□□□ 0.97
POLR1BQ9H9Y6 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
POLR1BQ9H9Y6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.08■□□□□ 0.96
POLR1BQ9H9Y6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
POLR1BQ9H9Y6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
POLR1BQ9H9Y6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR1BQ9H9Y6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
POLR1BQ9H9Y6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR1BQ9H9Y6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
POLR1BQ9H9Y6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
POLR1BQ9H9Y6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.07■□□□□ 0.96
POLR1BQ9H9Y6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
POLR1BQ9H9Y6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
POLR1BQ9H9Y6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.07■□□□□ 0.96
POLR1BQ9H9Y6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR1BQ9H9Y6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
POLR1BQ9H9Y6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
POLR1BQ9H9Y6 AC144652.1-201ENST00000609974 1624 ntBASIC21.07■□□□□ 0.96
POLR1BQ9H9Y6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR1BQ9H9Y6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR1BQ9H9Y6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR1BQ9H9Y6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.06■□□□□ 0.96
POLR1BQ9H9Y6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
POLR1BQ9H9Y6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
POLR1BQ9H9Y6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR1BQ9H9Y6 AL137060.1-201ENST00000618151 2648 ntBASIC21.06■□□□□ 0.96
POLR1BQ9H9Y6 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR1BQ9H9Y6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
POLR1BQ9H9Y6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR1BQ9H9Y6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR1BQ9H9Y6 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.06■□□□□ 0.96
POLR1BQ9H9Y6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.06■□□□□ 0.96
POLR1BQ9H9Y6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.06■□□□□ 0.96
POLR1BQ9H9Y6 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.06■□□□□ 0.96
POLR1BQ9H9Y6 AC104771.1-201ENST00000603335 964 ntBASIC21.06■□□□□ 0.96
POLR1BQ9H9Y6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR1BQ9H9Y6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR1BQ9H9Y6 AP004607.4-201ENST00000530158 1459 ntBASIC21.06■□□□□ 0.96
POLR1BQ9H9Y6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
POLR1BQ9H9Y6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.05■□□□□ 0.96
POLR1BQ9H9Y6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
POLR1BQ9H9Y6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
POLR1BQ9H9Y6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
POLR1BQ9H9Y6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
POLR1BQ9H9Y6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
POLR1BQ9H9Y6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.05■□□□□ 0.96
POLR1BQ9H9Y6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
POLR1BQ9H9Y6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.05■□□□□ 0.96
POLR1BQ9H9Y6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
POLR1BQ9H9Y6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
POLR1BQ9H9Y6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
POLR1BQ9H9Y6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
POLR1BQ9H9Y6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.05■□□□□ 0.96
POLR1BQ9H9Y6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
POLR1BQ9H9Y6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
POLR1BQ9H9Y6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
POLR1BQ9H9Y6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.04■□□□□ 0.96
POLR1BQ9H9Y6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
POLR1BQ9H9Y6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR1BQ9H9Y6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR1BQ9H9Y6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
POLR1BQ9H9Y6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR1BQ9H9Y6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR1BQ9H9Y6 AC006970.2-201ENST00000450065 779 ntBASIC21.04■□□□□ 0.96
POLR1BQ9H9Y6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.04■□□□□ 0.96
POLR1BQ9H9Y6 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
POLR1BQ9H9Y6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.04■□□□□ 0.96
POLR1BQ9H9Y6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR1BQ9H9Y6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR1BQ9H9Y6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR1BQ9H9Y6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
POLR1BQ9H9Y6 AC004854.2-201ENST00000608450 1441 ntBASIC21.04■□□□□ 0.96
POLR1BQ9H9Y6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
POLR1BQ9H9Y6 KRT19P1-201ENST00000405746 1186 ntBASIC21.03■□□□□ 0.96
POLR1BQ9H9Y6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.03■□□□□ 0.96
POLR1BQ9H9Y6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.03■□□□□ 0.96
POLR1BQ9H9Y6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
POLR1BQ9H9Y6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.03■□□□□ 0.96
POLR1BQ9H9Y6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
POLR1BQ9H9Y6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.02■□□□□ 0.96
POLR1BQ9H9Y6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
POLR1BQ9H9Y6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.02■□□□□ 0.96
POLR1BQ9H9Y6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
POLR1BQ9H9Y6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
POLR1BQ9H9Y6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.02■□□□□ 0.96
POLR1BQ9H9Y6 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.02■□□□□ 0.96
POLR1BQ9H9Y6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.02■□□□□ 0.96
POLR1BQ9H9Y6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
POLR1BQ9H9Y6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.02■□□□□ 0.96
POLR1BQ9H9Y6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
POLR1BQ9H9Y6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.02■□□□□ 0.96
POLR1BQ9H9Y6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
POLR1BQ9H9Y6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.95
POLR1BQ9H9Y6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms