Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.25■■□□□ 1.15
RNF38Q9H0F5 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.25■■□□□ 1.15
RNF38Q9H0F5 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RNF38Q9H0F5 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF38Q9H0F5 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
RNF38Q9H0F5 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.25■■□□□ 1.15
RNF38Q9H0F5 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.24■■□□□ 1.15
RNF38Q9H0F5 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF38Q9H0F5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.24■■□□□ 1.15
RNF38Q9H0F5 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RNF38Q9H0F5 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RNF38Q9H0F5 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.24■■□□□ 1.15
RNF38Q9H0F5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.24■■□□□ 1.15
RNF38Q9H0F5 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.24■■□□□ 1.15
RNF38Q9H0F5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF38Q9H0F5 UBE2DNL-204ENST00000602536 740 ntBASIC22.24■■□□□ 1.15
RNF38Q9H0F5 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
RNF38Q9H0F5 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF38Q9H0F5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF38Q9H0F5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF38Q9H0F5 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.23■■□□□ 1.15
RNF38Q9H0F5 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF38Q9H0F5 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF38Q9H0F5 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF38Q9H0F5 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF38Q9H0F5 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.23■■□□□ 1.15
RNF38Q9H0F5 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF38Q9H0F5 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.23■■□□□ 1.15
RNF38Q9H0F5 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.23■■□□□ 1.15
RNF38Q9H0F5 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.23■■□□□ 1.15
RNF38Q9H0F5 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.23■■□□□ 1.15
RNF38Q9H0F5 MFSD11-216ENST00000590393 1141 ntBASIC22.23■■□□□ 1.15
RNF38Q9H0F5 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF38Q9H0F5 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RNF38Q9H0F5 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF38Q9H0F5 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RNF38Q9H0F5 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF38Q9H0F5 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.23■■□□□ 1.15
RNF38Q9H0F5 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.23■■□□□ 1.15
RNF38Q9H0F5 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF38Q9H0F5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.22■■□□□ 1.15
RNF38Q9H0F5 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RNF38Q9H0F5 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF38Q9H0F5 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RNF38Q9H0F5 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF38Q9H0F5 CROCCP5-201ENST00000436658 830 ntBASIC22.22■■□□□ 1.15
RNF38Q9H0F5 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF38Q9H0F5 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.22■■□□□ 1.15
RNF38Q9H0F5 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.22■■□□□ 1.15
RNF38Q9H0F5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.22■■□□□ 1.15
RNF38Q9H0F5 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.22■■□□□ 1.15
RNF38Q9H0F5 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF38Q9H0F5 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RNF38Q9H0F5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF38Q9H0F5 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
RNF38Q9H0F5 AC080038.3-201ENST00000623346 1952 ntBASIC22.21■■□□□ 1.15
RNF38Q9H0F5 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF38Q9H0F5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RNF38Q9H0F5 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RNF38Q9H0F5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.21■■□□□ 1.15
RNF38Q9H0F5 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF38Q9H0F5 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF38Q9H0F5 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF38Q9H0F5 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
RNF38Q9H0F5 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.21■■□□□ 1.15
RNF38Q9H0F5 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
RNF38Q9H0F5 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF38Q9H0F5 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.21■■□□□ 1.15
RNF38Q9H0F5 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.21■■□□□ 1.15
RNF38Q9H0F5 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.21■■□□□ 1.15
RNF38Q9H0F5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.21■■□□□ 1.15
RNF38Q9H0F5 AC138907.5-202ENST00000569484 235 ntBASIC22.21■■□□□ 1.15
RNF38Q9H0F5 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RNF38Q9H0F5 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF38Q9H0F5 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.21■■□□□ 1.15
RNF38Q9H0F5 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF38Q9H0F5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF38Q9H0F5 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF38Q9H0F5 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF38Q9H0F5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.21■■□□□ 1.15
RNF38Q9H0F5 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
RNF38Q9H0F5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF38Q9H0F5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.21■■□□□ 1.15
RNF38Q9H0F5 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF38Q9H0F5 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF38Q9H0F5 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
RNF38Q9H0F5 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF38Q9H0F5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.2■■□□□ 1.14
RNF38Q9H0F5 HLA-L-209ENST00000420110 1011 ntBASIC22.2■■□□□ 1.14
RNF38Q9H0F5 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
RNF38Q9H0F5 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
RNF38Q9H0F5 EEF1DP3-203ENST00000566025 782 ntBASIC22.2■■□□□ 1.14
RNF38Q9H0F5 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.2■■□□□ 1.14
RNF38Q9H0F5 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RNF38Q9H0F5 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF38Q9H0F5 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.2■■□□□ 1.14
RNF38Q9H0F5 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RNF38Q9H0F5 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.2■■□□□ 1.14
RNF38Q9H0F5 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF38Q9H0F5 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms