Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SSBP3Q9BWW4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSBP3Q9BWW4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSBP3Q9BWW4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSBP3Q9BWW4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.81■□□□□ 0.44
SSBP3Q9BWW4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.81■□□□□ 0.44
SSBP3Q9BWW4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.81■□□□□ 0.44
SSBP3Q9BWW4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.81■□□□□ 0.44
SSBP3Q9BWW4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SSBP3Q9BWW4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.81■□□□□ 0.44
SSBP3Q9BWW4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.81■□□□□ 0.44
SSBP3Q9BWW4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.81■□□□□ 0.44
SSBP3Q9BWW4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSBP3Q9BWW4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSBP3Q9BWW4 ESRRAP2-201ENST00000418437 1549 ntBASIC17.81■□□□□ 0.44
SSBP3Q9BWW4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SSBP3Q9BWW4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSBP3Q9BWW4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.81■□□□□ 0.44
SSBP3Q9BWW4 AC004854.2-201ENST00000608450 1441 ntBASIC17.81■□□□□ 0.44
SSBP3Q9BWW4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.8■□□□□ 0.44
SSBP3Q9BWW4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSBP3Q9BWW4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.8■□□□□ 0.44
SSBP3Q9BWW4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSBP3Q9BWW4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSBP3Q9BWW4 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.8■□□□□ 0.44
SSBP3Q9BWW4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.8■□□□□ 0.44
SSBP3Q9BWW4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSBP3Q9BWW4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.8■□□□□ 0.44
SSBP3Q9BWW4 AP004607.4-201ENST00000530158 1459 ntBASIC17.8■□□□□ 0.44
SSBP3Q9BWW4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SSBP3Q9BWW4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SSBP3Q9BWW4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SSBP3Q9BWW4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SSBP3Q9BWW4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SSBP3Q9BWW4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SSBP3Q9BWW4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 AC139530.1-201ENST00000575312 1977 ntBASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 KRT19P1-201ENST00000405746 1186 ntBASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 IKBKGP1-201ENST00000612193 1073 ntBASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 KRT87P-202ENST00000534226 1464 ntBASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSBP3Q9BWW4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSBP3Q9BWW4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SSBP3Q9BWW4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
SSBP3Q9BWW4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.78■□□□□ 0.44
SSBP3Q9BWW4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SSBP3Q9BWW4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.78■□□□□ 0.44
SSBP3Q9BWW4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.78■□□□□ 0.44
SSBP3Q9BWW4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.78■□□□□ 0.44
SSBP3Q9BWW4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.78■□□□□ 0.44
SSBP3Q9BWW4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSBP3Q9BWW4 C1orf229-201ENST00000623686 2258 ntBASIC17.78■□□□□ 0.44
SSBP3Q9BWW4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSBP3Q9BWW4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.77■□□□□ 0.44
SSBP3Q9BWW4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SSBP3Q9BWW4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.77■□□□□ 0.44
SSBP3Q9BWW4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSBP3Q9BWW4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSBP3Q9BWW4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSBP3Q9BWW4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.77■□□□□ 0.44
SSBP3Q9BWW4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.77■□□□□ 0.44
SSBP3Q9BWW4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSBP3Q9BWW4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.77■□□□□ 0.44
SSBP3Q9BWW4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SSBP3Q9BWW4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.77■□□□□ 0.44
SSBP3Q9BWW4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.77■□□□□ 0.44
SSBP3Q9BWW4 AC016769.1-201ENST00000409132 1010 ntBASIC17.77■□□□□ 0.44
SSBP3Q9BWW4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.77■□□□□ 0.44
SSBP3Q9BWW4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SSBP3Q9BWW4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSBP3Q9BWW4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSBP3Q9BWW4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SSBP3Q9BWW4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
SSBP3Q9BWW4 PKD1P6-201ENST00000343738 4769 ntBASIC17.77■□□□□ 0.43
SSBP3Q9BWW4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SSBP3Q9BWW4 AC055733.4-201ENST00000638462 1354 ntBASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms