Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB3IPQ96QF0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.85■□□□□ 0.93
RAB3IPQ96QF0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
RAB3IPQ96QF0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAB3IPQ96QF0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.85■□□□□ 0.93
RAB3IPQ96QF0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB3IPQ96QF0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.85■□□□□ 0.93
RAB3IPQ96QF0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.85■□□□□ 0.93
RAB3IPQ96QF0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAB3IPQ96QF0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB3IPQ96QF0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB3IPQ96QF0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.85■□□□□ 0.93
RAB3IPQ96QF0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAB3IPQ96QF0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAB3IPQ96QF0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.84■□□□□ 0.93
RAB3IPQ96QF0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB3IPQ96QF0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RAB3IPQ96QF0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB3IPQ96QF0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAB3IPQ96QF0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.84■□□□□ 0.93
RAB3IPQ96QF0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RAB3IPQ96QF0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.84■□□□□ 0.93
RAB3IPQ96QF0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.84■□□□□ 0.93
RAB3IPQ96QF0 MIR4449-201ENST00000578365 66 ntBASIC20.84■□□□□ 0.93
RAB3IPQ96QF0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAB3IPQ96QF0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.84■□□□□ 0.93
RAB3IPQ96QF0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAB3IPQ96QF0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB3IPQ96QF0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB3IPQ96QF0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB3IPQ96QF0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.83■□□□□ 0.93
RAB3IPQ96QF0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAB3IPQ96QF0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAB3IPQ96QF0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAB3IPQ96QF0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
RAB3IPQ96QF0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RAB3IPQ96QF0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.83■□□□□ 0.93
RAB3IPQ96QF0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
RAB3IPQ96QF0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
RAB3IPQ96QF0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAB3IPQ96QF0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAB3IPQ96QF0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
RAB3IPQ96QF0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.83■□□□□ 0.92
RAB3IPQ96QF0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAB3IPQ96QF0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RAB3IPQ96QF0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
RAB3IPQ96QF0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB3IPQ96QF0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB3IPQ96QF0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB3IPQ96QF0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.82■□□□□ 0.92
RAB3IPQ96QF0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.82■□□□□ 0.92
RAB3IPQ96QF0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB3IPQ96QF0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB3IPQ96QF0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB3IPQ96QF0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB3IPQ96QF0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB3IPQ96QF0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAB3IPQ96QF0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.81■□□□□ 0.92
RAB3IPQ96QF0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RAB3IPQ96QF0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RAB3IPQ96QF0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB3IPQ96QF0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB3IPQ96QF0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.81■□□□□ 0.92
RAB3IPQ96QF0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.81■□□□□ 0.92
RAB3IPQ96QF0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB3IPQ96QF0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RAB3IPQ96QF0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.81■□□□□ 0.92
RAB3IPQ96QF0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB3IPQ96QF0 AL020996.1-203ENST00000536896 2307 ntBASIC20.81■□□□□ 0.92
RAB3IPQ96QF0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RAB3IPQ96QF0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RAB3IPQ96QF0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB3IPQ96QF0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB3IPQ96QF0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB3IPQ96QF0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB3IPQ96QF0 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB3IPQ96QF0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB3IPQ96QF0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB3IPQ96QF0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.8■□□□□ 0.92
RAB3IPQ96QF0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB3IPQ96QF0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB3IPQ96QF0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RAB3IPQ96QF0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB3IPQ96QF0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.8■□□□□ 0.92
RAB3IPQ96QF0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB3IPQ96QF0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB3IPQ96QF0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB3IPQ96QF0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB3IPQ96QF0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB3IPQ96QF0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB3IPQ96QF0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB3IPQ96QF0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RAB3IPQ96QF0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.79■□□□□ 0.92
RAB3IPQ96QF0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB3IPQ96QF0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RAB3IPQ96QF0 CA15P2-201ENST00000611168 834 ntBASIC20.79■□□□□ 0.92
RAB3IPQ96QF0 AC011551.1-201ENST00000614101 683 ntBASIC20.79■□□□□ 0.92
RAB3IPQ96QF0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.79■□□□□ 0.92
RAB3IPQ96QF0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
RAB3IPQ96QF0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms