Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PDLIM5Q96HC4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PDLIM5Q96HC4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDLIM5Q96HC4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDLIM5Q96HC4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDLIM5Q96HC4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDLIM5Q96HC4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.97■□□□□ 0.95
PDLIM5Q96HC4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.97■□□□□ 0.95
PDLIM5Q96HC4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PDLIM5Q96HC4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PDLIM5Q96HC4 AL136967.2-201ENST00000623968 743 ntBASIC20.97■□□□□ 0.95
PDLIM5Q96HC4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.97■□□□□ 0.95
PDLIM5Q96HC4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDLIM5Q96HC4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PDLIM5Q96HC4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.97■□□□□ 0.95
PDLIM5Q96HC4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.96■□□□□ 0.95
PDLIM5Q96HC4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.96■□□□□ 0.95
PDLIM5Q96HC4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDLIM5Q96HC4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDLIM5Q96HC4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.96■□□□□ 0.95
PDLIM5Q96HC4 AC003102.1-202ENST00000563394 1796 ntBASIC20.96■□□□□ 0.95
PDLIM5Q96HC4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDLIM5Q96HC4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.96■□□□□ 0.95
PDLIM5Q96HC4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.96■□□□□ 0.95
PDLIM5Q96HC4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDLIM5Q96HC4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.96■□□□□ 0.95
PDLIM5Q96HC4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.96■□□□□ 0.95
PDLIM5Q96HC4 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.96■□□□□ 0.95
PDLIM5Q96HC4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDLIM5Q96HC4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PDLIM5Q96HC4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDLIM5Q96HC4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDLIM5Q96HC4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDLIM5Q96HC4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.95■□□□□ 0.94
PDLIM5Q96HC4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
PDLIM5Q96HC4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.95■□□□□ 0.94
PDLIM5Q96HC4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.95■□□□□ 0.94
PDLIM5Q96HC4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDLIM5Q96HC4 AP006587.3-201ENST00000525742 1516 ntBASIC20.95■□□□□ 0.94
PDLIM5Q96HC4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDLIM5Q96HC4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDLIM5Q96HC4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDLIM5Q96HC4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.95■□□□□ 0.94
PDLIM5Q96HC4 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.95■□□□□ 0.94
PDLIM5Q96HC4 AC091305.1-201ENST00000479476 895 ntBASIC20.95■□□□□ 0.94
PDLIM5Q96HC4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.95■□□□□ 0.94
PDLIM5Q96HC4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDLIM5Q96HC4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDLIM5Q96HC4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDLIM5Q96HC4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDLIM5Q96HC4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.95■□□□□ 0.94
PDLIM5Q96HC4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDLIM5Q96HC4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.94■□□□□ 0.94
PDLIM5Q96HC4 Z98882.1-201ENST00000622160 2253 ntBASIC20.94■□□□□ 0.94
PDLIM5Q96HC4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PDLIM5Q96HC4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
PDLIM5Q96HC4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDLIM5Q96HC4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PDLIM5Q96HC4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PDLIM5Q96HC4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDLIM5Q96HC4 SUDS3P1-201ENST00000505831 966 ntBASIC20.94■□□□□ 0.94
PDLIM5Q96HC4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PDLIM5Q96HC4 AL139246.5-201ENST00000606645 996 ntBASIC20.94■□□□□ 0.94
PDLIM5Q96HC4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDLIM5Q96HC4 TSPY26P-201ENST00000476365 1326 ntBASIC20.94■□□□□ 0.94
PDLIM5Q96HC4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDLIM5Q96HC4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDLIM5Q96HC4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDLIM5Q96HC4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PDLIM5Q96HC4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDLIM5Q96HC4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDLIM5Q96HC4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PDLIM5Q96HC4 AF213884.3-201ENST00000563833 479 ntBASIC20.93■□□□□ 0.94
PDLIM5Q96HC4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PDLIM5Q96HC4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDLIM5Q96HC4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.93■□□□□ 0.94
PDLIM5Q96HC4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.93■□□□□ 0.94
PDLIM5Q96HC4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDLIM5Q96HC4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDLIM5Q96HC4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.92■□□□□ 0.94
PDLIM5Q96HC4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDLIM5Q96HC4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDLIM5Q96HC4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDLIM5Q96HC4 MIR572-201ENST00000384983 95 ntBASIC20.92■□□□□ 0.94
PDLIM5Q96HC4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.92■□□□□ 0.94
PDLIM5Q96HC4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDLIM5Q96HC4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDLIM5Q96HC4 AC009237.3-201ENST00000393279 1427 ntBASIC20.92■□□□□ 0.94
PDLIM5Q96HC4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDLIM5Q96HC4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDLIM5Q96HC4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDLIM5Q96HC4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDLIM5Q96HC4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.91■□□□□ 0.94
PDLIM5Q96HC4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDLIM5Q96HC4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDLIM5Q96HC4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PDLIM5Q96HC4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.91■□□□□ 0.94
PDLIM5Q96HC4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.91■□□□□ 0.94
PDLIM5Q96HC4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.91■□□□□ 0.94
PDLIM5Q96HC4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms