Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.13■□□□□ 0.81
SLC47A1Q96FL8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC47A1Q96FL8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SLC47A1Q96FL8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.13■□□□□ 0.81
SLC47A1Q96FL8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC47A1Q96FL8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.12■□□□□ 0.81
SLC47A1Q96FL8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC47A1Q96FL8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.12■□□□□ 0.81
SLC47A1Q96FL8 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.12■□□□□ 0.81
SLC47A1Q96FL8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.12■□□□□ 0.81
SLC47A1Q96FL8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC47A1Q96FL8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC47A1Q96FL8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.12■□□□□ 0.81
SLC47A1Q96FL8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC47A1Q96FL8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC47A1Q96FL8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC47A1Q96FL8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC47A1Q96FL8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SLC47A1Q96FL8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC47A1Q96FL8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC47A1Q96FL8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.11■□□□□ 0.81
SLC47A1Q96FL8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.11■□□□□ 0.81
SLC47A1Q96FL8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SLC47A1Q96FL8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC47A1Q96FL8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC47A1Q96FL8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC47A1Q96FL8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.11■□□□□ 0.81
SLC47A1Q96FL8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC47A1Q96FL8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC47A1Q96FL8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC47A1Q96FL8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC47A1Q96FL8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC47A1Q96FL8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC47A1Q96FL8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC47A1Q96FL8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC47A1Q96FL8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.1■□□□□ 0.81
SLC47A1Q96FL8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC47A1Q96FL8 GUSBP5-201ENST00000418136 578 ntBASIC20.1■□□□□ 0.81
SLC47A1Q96FL8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC47A1Q96FL8 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.1■□□□□ 0.81
SLC47A1Q96FL8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC47A1Q96FL8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SLC47A1Q96FL8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC47A1Q96FL8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.1■□□□□ 0.81
SLC47A1Q96FL8 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.1■□□□□ 0.81
SLC47A1Q96FL8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC47A1Q96FL8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SLC47A1Q96FL8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC47A1Q96FL8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
SLC47A1Q96FL8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC47A1Q96FL8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC47A1Q96FL8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SLC47A1Q96FL8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC47A1Q96FL8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC47A1Q96FL8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
SLC47A1Q96FL8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC47A1Q96FL8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.09■□□□□ 0.81
SLC47A1Q96FL8 LINC01521-201ENST00000504184 1943 ntBASIC20.09■□□□□ 0.81
SLC47A1Q96FL8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC47A1Q96FL8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SLC47A1Q96FL8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC47A1Q96FL8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.08■□□□□ 0.81
SLC47A1Q96FL8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.08■□□□□ 0.81
SLC47A1Q96FL8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC47A1Q96FL8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.08■□□□□ 0.81
SLC47A1Q96FL8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SLC47A1Q96FL8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.08■□□□□ 0.81
SLC47A1Q96FL8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC47A1Q96FL8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC47A1Q96FL8 AL356740.2-201ENST00000601559 647 ntBASIC20.08■□□□□ 0.81
SLC47A1Q96FL8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
SLC47A1Q96FL8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC47A1Q96FL8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
SLC47A1Q96FL8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC47A1Q96FL8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
SLC47A1Q96FL8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC47A1Q96FL8 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC47A1Q96FL8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC47A1Q96FL8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC47A1Q96FL8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC47A1Q96FL8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC47A1Q96FL8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC47A1Q96FL8 AC241377.3-202ENST00000626088 1088 ntBASIC20.07■□□□□ 0.8
SLC47A1Q96FL8 AC241585.3-202ENST00000628937 1088 ntBASIC20.07■□□□□ 0.8
SLC47A1Q96FL8 AC245100.8-202ENST00000629247 1058 ntBASIC20.07■□□□□ 0.8
SLC47A1Q96FL8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC47A1Q96FL8 AC026471.6-201ENST00000622954 1905 ntBASIC20.07■□□□□ 0.8
SLC47A1Q96FL8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC47A1Q96FL8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC47A1Q96FL8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC47A1Q96FL8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.07■□□□□ 0.8
SLC47A1Q96FL8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC47A1Q96FL8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SLC47A1Q96FL8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC47A1Q96FL8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC47A1Q96FL8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC47A1Q96FL8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC47A1Q96FL8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC47A1Q96FL8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC47A1Q96FL8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms