Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
DDX11Q96FC9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
DDX11Q96FC9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC25.38■■□□□ 1.65
DDX11Q96FC9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
DDX11Q96FC9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC25.38■■□□□ 1.65
DDX11Q96FC9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
DDX11Q96FC9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC25.38■■□□□ 1.65
DDX11Q96FC9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC25.38■■□□□ 1.65
DDX11Q96FC9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC25.38■■□□□ 1.65
DDX11Q96FC9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
DDX11Q96FC9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
DDX11Q96FC9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC25.38■■□□□ 1.65
DDX11Q96FC9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC25.38■■□□□ 1.65
DDX11Q96FC9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC25.38■■□□□ 1.65
DDX11Q96FC9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
DDX11Q96FC9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
DDX11Q96FC9 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
DDX11Q96FC9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC25.37■■□□□ 1.65
DDX11Q96FC9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
DDX11Q96FC9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC25.37■■□□□ 1.65
DDX11Q96FC9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
DDX11Q96FC9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
DDX11Q96FC9 RARRES2P11-201ENST00000635158 484 ntBASIC25.37■■□□□ 1.65
DDX11Q96FC9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
DDX11Q96FC9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC25.37■■□□□ 1.65
DDX11Q96FC9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
DDX11Q96FC9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
DDX11Q96FC9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
DDX11Q96FC9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
DDX11Q96FC9 FBXW4P1-201ENST00000426721 2239 ntBASIC25.36■■□□□ 1.65
DDX11Q96FC9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
DDX11Q96FC9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
DDX11Q96FC9 LINC02228-203ENST00000641970 1355 ntBASIC25.36■■□□□ 1.65
DDX11Q96FC9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC25.36■■□□□ 1.65
DDX11Q96FC9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
DDX11Q96FC9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
DDX11Q96FC9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC25.36■■□□□ 1.65
DDX11Q96FC9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
DDX11Q96FC9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC25.36■■□□□ 1.65
DDX11Q96FC9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC25.36■■□□□ 1.65
DDX11Q96FC9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
DDX11Q96FC9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC25.36■■□□□ 1.65
DDX11Q96FC9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
DDX11Q96FC9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC25.36■■□□□ 1.65
DDX11Q96FC9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.36■■□□□ 1.65
DDX11Q96FC9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
DDX11Q96FC9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC25.35■■□□□ 1.65
DDX11Q96FC9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
DDX11Q96FC9 GXYLT1P2-201ENST00000433312 1230 ntBASIC25.35■■□□□ 1.65
DDX11Q96FC9 AC090192.1-201ENST00000517740 490 ntBASIC25.35■■□□□ 1.65
DDX11Q96FC9 KRT18P14-201ENST00000534205 1250 ntBASIC25.35■■□□□ 1.65
DDX11Q96FC9 AC105233.4-201ENST00000642045 216 ntBASIC25.35■■□□□ 1.65
DDX11Q96FC9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC25.35■■□□□ 1.65
DDX11Q96FC9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
DDX11Q96FC9 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
DDX11Q96FC9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
DDX11Q96FC9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC25.34■■□□□ 1.65
DDX11Q96FC9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC25.34■■□□□ 1.65
DDX11Q96FC9 NT5C3AP1-201ENST00000394500 1012 ntBASIC25.34■■□□□ 1.65
DDX11Q96FC9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC25.34■■□□□ 1.65
DDX11Q96FC9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
DDX11Q96FC9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC25.34■■□□□ 1.65
DDX11Q96FC9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC25.34■■□□□ 1.65
DDX11Q96FC9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
DDX11Q96FC9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
DDX11Q96FC9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC25.33■■□□□ 1.65
DDX11Q96FC9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
DDX11Q96FC9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
DDX11Q96FC9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
DDX11Q96FC9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC25.33■■□□□ 1.65
DDX11Q96FC9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC25.33■■□□□ 1.65
DDX11Q96FC9 NTF6G-201ENST00000591094 616 ntBASIC25.33■■□□□ 1.65
DDX11Q96FC9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.64
DDX11Q96FC9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
DDX11Q96FC9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
DDX11Q96FC9 AC007375.3-201ENST00000600936 2314 ntBASIC25.32■■□□□ 1.64
DDX11Q96FC9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
DDX11Q96FC9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
DDX11Q96FC9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
DDX11Q96FC9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
DDX11Q96FC9 TERF1P2-201ENST00000583350 1212 ntBASIC25.32■■□□□ 1.64
DDX11Q96FC9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
DDX11Q96FC9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC25.32■■□□□ 1.64
DDX11Q96FC9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
DDX11Q96FC9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
DDX11Q96FC9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC25.32■■□□□ 1.64
DDX11Q96FC9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC25.32■■□□□ 1.64
DDX11Q96FC9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC25.32■■□□□ 1.64
DDX11Q96FC9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
DDX11Q96FC9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
DDX11Q96FC9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
DDX11Q96FC9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
DDX11Q96FC9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
DDX11Q96FC9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
DDX11Q96FC9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
DDX11Q96FC9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
DDX11Q96FC9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC25.31■■□□□ 1.64
DDX11Q96FC9 AC092437.1-201ENST00000624794 1048 ntBASIC25.31■■□□□ 1.64
DDX11Q96FC9 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
DDX11Q96FC9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC25.31■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms