Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 AC073111.5-205ENST00000641717 521 ntBASIC20.59■□□□□ 0.89
RNF31Q96EP0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF31Q96EP0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF31Q96EP0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF31Q96EP0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF31Q96EP0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF31Q96EP0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF31Q96EP0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF31Q96EP0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF31Q96EP0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF31Q96EP0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF31Q96EP0 AC006015.1-201ENST00000429970 570 ntBASIC20.58■□□□□ 0.89
RNF31Q96EP0 CDCA4P2-201ENST00000441182 718 ntBASIC20.58■□□□□ 0.89
RNF31Q96EP0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF31Q96EP0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF31Q96EP0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RNF31Q96EP0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
RNF31Q96EP0 ESRRAP2-201ENST00000418437 1549 ntBASIC20.58■□□□□ 0.88
RNF31Q96EP0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF31Q96EP0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF31Q96EP0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF31Q96EP0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF31Q96EP0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
RNF31Q96EP0 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF31Q96EP0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF31Q96EP0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF31Q96EP0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF31Q96EP0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.57■□□□□ 0.88
RNF31Q96EP0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF31Q96EP0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF31Q96EP0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF31Q96EP0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF31Q96EP0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF31Q96EP0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RNF31Q96EP0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF31Q96EP0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF31Q96EP0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RNF31Q96EP0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF31Q96EP0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF31Q96EP0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF31Q96EP0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF31Q96EP0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.56■□□□□ 0.88
RNF31Q96EP0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RNF31Q96EP0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF31Q96EP0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.56■□□□□ 0.88
RNF31Q96EP0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF31Q96EP0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF31Q96EP0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.56■□□□□ 0.88
RNF31Q96EP0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
RNF31Q96EP0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RNF31Q96EP0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF31Q96EP0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF31Q96EP0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF31Q96EP0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RNF31Q96EP0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF31Q96EP0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF31Q96EP0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF31Q96EP0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF31Q96EP0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF31Q96EP0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF31Q96EP0 AL024507.2-201ENST00000606070 2574 ntBASIC20.55■□□□□ 0.88
RNF31Q96EP0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF31Q96EP0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF31Q96EP0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF31Q96EP0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF31Q96EP0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF31Q96EP0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF31Q96EP0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF31Q96EP0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF31Q96EP0 AC104187.1-201ENST00000607510 612 ntBASIC20.55■□□□□ 0.88
RNF31Q96EP0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF31Q96EP0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF31Q96EP0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF31Q96EP0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF31Q96EP0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF31Q96EP0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF31Q96EP0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.54■□□□□ 0.88
RNF31Q96EP0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.54■□□□□ 0.88
RNF31Q96EP0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF31Q96EP0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF31Q96EP0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF31Q96EP0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RNF31Q96EP0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF31Q96EP0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RNF31Q96EP0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF31Q96EP0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF31Q96EP0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF31Q96EP0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF31Q96EP0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF31Q96EP0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF31Q96EP0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF31Q96EP0 AC005224.4-201ENST00000583262 1652 ntBASIC20.53■□□□□ 0.88
RNF31Q96EP0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RNF31Q96EP0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
RNF31Q96EP0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF31Q96EP0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF31Q96EP0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF31Q96EP0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF31Q96EP0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.52■□□□□ 0.88
RNF31Q96EP0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms