Protein–RNA interactions for Protein: Q96AK3

APOBEC3D, DNA dC->dU-editing enzyme APOBEC-3D, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3DQ96AK3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.55■□□□□ 0.56
APOBEC3DQ96AK3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.55■□□□□ 0.56
APOBEC3DQ96AK3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
APOBEC3DQ96AK3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOBEC3DQ96AK3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
APOBEC3DQ96AK3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOBEC3DQ96AK3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
APOBEC3DQ96AK3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
APOBEC3DQ96AK3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.54■□□□□ 0.56
APOBEC3DQ96AK3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOBEC3DQ96AK3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.54■□□□□ 0.56
APOBEC3DQ96AK3 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.54■□□□□ 0.56
APOBEC3DQ96AK3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APOBEC3DQ96AK3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
APOBEC3DQ96AK3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.54■□□□□ 0.56
APOBEC3DQ96AK3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.54■□□□□ 0.56
APOBEC3DQ96AK3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.54■□□□□ 0.56
APOBEC3DQ96AK3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.54■□□□□ 0.56
APOBEC3DQ96AK3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APOBEC3DQ96AK3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOBEC3DQ96AK3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOBEC3DQ96AK3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOBEC3DQ96AK3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
APOBEC3DQ96AK3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOBEC3DQ96AK3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOBEC3DQ96AK3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOBEC3DQ96AK3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOBEC3DQ96AK3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
APOBEC3DQ96AK3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.53■□□□□ 0.56
APOBEC3DQ96AK3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.53■□□□□ 0.56
APOBEC3DQ96AK3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOBEC3DQ96AK3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOBEC3DQ96AK3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
APOBEC3DQ96AK3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.53■□□□□ 0.56
APOBEC3DQ96AK3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
APOBEC3DQ96AK3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOBEC3DQ96AK3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.53■□□□□ 0.56
APOBEC3DQ96AK3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
APOBEC3DQ96AK3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
APOBEC3DQ96AK3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.53■□□□□ 0.56
APOBEC3DQ96AK3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
APOBEC3DQ96AK3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOBEC3DQ96AK3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.53■□□□□ 0.56
APOBEC3DQ96AK3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
APOBEC3DQ96AK3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.53■□□□□ 0.56
APOBEC3DQ96AK3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOBEC3DQ96AK3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APOBEC3DQ96AK3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
APOBEC3DQ96AK3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOBEC3DQ96AK3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOBEC3DQ96AK3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APOBEC3DQ96AK3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOBEC3DQ96AK3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOBEC3DQ96AK3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOBEC3DQ96AK3 AC009237.3-201ENST00000393279 1427 ntBASIC18.52■□□□□ 0.56
APOBEC3DQ96AK3 FBXW4P1-201ENST00000426721 2239 ntBASIC18.52■□□□□ 0.56
APOBEC3DQ96AK3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
APOBEC3DQ96AK3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOBEC3DQ96AK3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APOBEC3DQ96AK3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.52■□□□□ 0.56
APOBEC3DQ96AK3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.52■□□□□ 0.56
APOBEC3DQ96AK3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.52■□□□□ 0.56
APOBEC3DQ96AK3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.52■□□□□ 0.56
APOBEC3DQ96AK3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
APOBEC3DQ96AK3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
APOBEC3DQ96AK3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.51■□□□□ 0.55
APOBEC3DQ96AK3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.51■□□□□ 0.55
APOBEC3DQ96AK3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
APOBEC3DQ96AK3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APOBEC3DQ96AK3 AL354811.1-201ENST00000610286 706 ntBASIC18.51■□□□□ 0.55
APOBEC3DQ96AK3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
APOBEC3DQ96AK3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
APOBEC3DQ96AK3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APOBEC3DQ96AK3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APOBEC3DQ96AK3 AC010542.4-201ENST00000563151 1910 ntBASIC18.51■□□□□ 0.55
APOBEC3DQ96AK3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APOBEC3DQ96AK3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
APOBEC3DQ96AK3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APOBEC3DQ96AK3 BX005040.4-201ENST00000637145 1518 ntBASIC18.5■□□□□ 0.55
APOBEC3DQ96AK3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APOBEC3DQ96AK3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APOBEC3DQ96AK3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.5■□□□□ 0.55
APOBEC3DQ96AK3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.5■□□□□ 0.55
APOBEC3DQ96AK3 AC105265.2-201ENST00000467189 838 ntBASIC18.5■□□□□ 0.55
APOBEC3DQ96AK3 AC104564.3-201ENST00000582367 638 ntBASIC18.5■□□□□ 0.55
APOBEC3DQ96AK3 AL358852.1-201ENST00000623174 1268 ntBASIC18.5■□□□□ 0.55
APOBEC3DQ96AK3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APOBEC3DQ96AK3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APOBEC3DQ96AK3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
APOBEC3DQ96AK3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APOBEC3DQ96AK3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.5■□□□□ 0.55
APOBEC3DQ96AK3 AP006587.3-201ENST00000525742 1516 ntBASIC18.49■□□□□ 0.55
APOBEC3DQ96AK3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APOBEC3DQ96AK3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APOBEC3DQ96AK3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
APOBEC3DQ96AK3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APOBEC3DQ96AK3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
APOBEC3DQ96AK3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APOBEC3DQ96AK3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
APOBEC3DQ96AK3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms