Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2E3Q969T4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2E3Q969T4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2E3Q969T4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
UBE2E3Q969T4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.59■□□□□ 0.89
UBE2E3Q969T4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2E3Q969T4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2E3Q969T4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2E3Q969T4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2E3Q969T4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2E3Q969T4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2E3Q969T4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2E3Q969T4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2E3Q969T4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.59■□□□□ 0.89
UBE2E3Q969T4 AC142381.2-201ENST00000566120 298 ntBASIC20.59■□□□□ 0.89
UBE2E3Q969T4 AC104564.3-201ENST00000582367 638 ntBASIC20.59■□□□□ 0.89
UBE2E3Q969T4 AC105233.4-201ENST00000642045 216 ntBASIC20.59■□□□□ 0.89
UBE2E3Q969T4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2E3Q969T4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2E3Q969T4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2E3Q969T4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
UBE2E3Q969T4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.58■□□□□ 0.89
UBE2E3Q969T4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBE2E3Q969T4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
UBE2E3Q969T4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBE2E3Q969T4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBE2E3Q969T4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
UBE2E3Q969T4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.58■□□□□ 0.89
UBE2E3Q969T4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UBE2E3Q969T4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.58■□□□□ 0.89
UBE2E3Q969T4 AC010542.4-201ENST00000563151 1910 ntBASIC20.58■□□□□ 0.88
UBE2E3Q969T4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
UBE2E3Q969T4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
UBE2E3Q969T4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBE2E3Q969T4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBE2E3Q969T4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
UBE2E3Q969T4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.57■□□□□ 0.88
UBE2E3Q969T4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
UBE2E3Q969T4 MIR572-201ENST00000384983 95 ntBASIC20.57■□□□□ 0.88
UBE2E3Q969T4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.57■□□□□ 0.88
UBE2E3Q969T4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.57■□□□□ 0.88
UBE2E3Q969T4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.57■□□□□ 0.88
UBE2E3Q969T4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBE2E3Q969T4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBE2E3Q969T4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBE2E3Q969T4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2E3Q969T4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2E3Q969T4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
UBE2E3Q969T4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2E3Q969T4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
UBE2E3Q969T4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2E3Q969T4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2E3Q969T4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2E3Q969T4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2E3Q969T4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2E3Q969T4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
UBE2E3Q969T4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBE2E3Q969T4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBE2E3Q969T4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.55■□□□□ 0.88
UBE2E3Q969T4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.55■□□□□ 0.88
UBE2E3Q969T4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBE2E3Q969T4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBE2E3Q969T4 AC009237.3-201ENST00000393279 1427 ntBASIC20.55■□□□□ 0.88
UBE2E3Q969T4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.55■□□□□ 0.88
UBE2E3Q969T4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
UBE2E3Q969T4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.55■□□□□ 0.88
UBE2E3Q969T4 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.55■□□□□ 0.88
UBE2E3Q969T4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBE2E3Q969T4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.54■□□□□ 0.88
UBE2E3Q969T4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UBE2E3Q969T4 AC244015.2-201ENST00000616358 1861 ntBASIC20.54■□□□□ 0.88
UBE2E3Q969T4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBE2E3Q969T4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBE2E3Q969T4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.54■□□□□ 0.88
UBE2E3Q969T4 AC005837.3-201ENST00000612163 286 ntBASIC20.54■□□□□ 0.88
UBE2E3Q969T4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBE2E3Q969T4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBE2E3Q969T4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBE2E3Q969T4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2E3Q969T4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
UBE2E3Q969T4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2E3Q969T4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.53■□□□□ 0.88
UBE2E3Q969T4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2E3Q969T4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2E3Q969T4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.53■□□□□ 0.88
UBE2E3Q969T4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.53■□□□□ 0.88
UBE2E3Q969T4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.53■□□□□ 0.88
UBE2E3Q969T4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
UBE2E3Q969T4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.53■□□□□ 0.88
UBE2E3Q969T4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2E3Q969T4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.53■□□□□ 0.88
UBE2E3Q969T4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.53■□□□□ 0.88
UBE2E3Q969T4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2E3Q969T4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2E3Q969T4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.53■□□□□ 0.88
UBE2E3Q969T4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
UBE2E3Q969T4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2E3Q969T4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2E3Q969T4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2E3Q969T4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms