Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.49■□□□□ 0.71
RNF138Q8WVD3 AC003102.1-202ENST00000563394 1796 ntBASIC19.49■□□□□ 0.71
RNF138Q8WVD3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
RNF138Q8WVD3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF138Q8WVD3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF138Q8WVD3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF138Q8WVD3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
RNF138Q8WVD3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF138Q8WVD3 AC079140.4-201ENST00000507448 529 ntBASIC19.49■□□□□ 0.71
RNF138Q8WVD3 EEF1DP3-203ENST00000566025 782 ntBASIC19.49■□□□□ 0.71
RNF138Q8WVD3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF138Q8WVD3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF138Q8WVD3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF138Q8WVD3 KRT87P-202ENST00000534226 1464 ntBASIC19.48■□□□□ 0.71
RNF138Q8WVD3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF138Q8WVD3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF138Q8WVD3 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.48■□□□□ 0.71
RNF138Q8WVD3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF138Q8WVD3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.48■□□□□ 0.71
RNF138Q8WVD3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF138Q8WVD3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF138Q8WVD3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.48■□□□□ 0.71
RNF138Q8WVD3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
RNF138Q8WVD3 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.48■□□□□ 0.71
RNF138Q8WVD3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF138Q8WVD3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RNF138Q8WVD3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF138Q8WVD3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.48■□□□□ 0.71
RNF138Q8WVD3 AP004607.4-201ENST00000530158 1459 ntBASIC19.48■□□□□ 0.71
RNF138Q8WVD3 EP400NL-214ENST00000641289 2402 ntBASIC19.47■□□□□ 0.71
RNF138Q8WVD3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF138Q8WVD3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF138Q8WVD3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF138Q8WVD3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF138Q8WVD3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF138Q8WVD3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.47■□□□□ 0.71
RNF138Q8WVD3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.47■□□□□ 0.71
RNF138Q8WVD3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF138Q8WVD3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF138Q8WVD3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF138Q8WVD3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF138Q8WVD3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RNF138Q8WVD3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF138Q8WVD3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.46■□□□□ 0.71
RNF138Q8WVD3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF138Q8WVD3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF138Q8WVD3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF138Q8WVD3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF138Q8WVD3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RNF138Q8WVD3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF138Q8WVD3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
RNF138Q8WVD3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RNF138Q8WVD3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF138Q8WVD3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF138Q8WVD3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.46■□□□□ 0.71
RNF138Q8WVD3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RNF138Q8WVD3 KRT18P5-201ENST00000436075 1291 ntBASIC19.46■□□□□ 0.71
RNF138Q8WVD3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RNF138Q8WVD3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF138Q8WVD3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF138Q8WVD3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF138Q8WVD3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF138Q8WVD3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF138Q8WVD3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF138Q8WVD3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF138Q8WVD3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RNF138Q8WVD3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF138Q8WVD3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RNF138Q8WVD3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF138Q8WVD3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF138Q8WVD3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.45■□□□□ 0.7
RNF138Q8WVD3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF138Q8WVD3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.45■□□□□ 0.7
RNF138Q8WVD3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF138Q8WVD3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF138Q8WVD3 AL162430.1-201ENST00000480705 870 ntBASIC19.45■□□□□ 0.7
RNF138Q8WVD3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.45■□□□□ 0.7
RNF138Q8WVD3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RNF138Q8WVD3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF138Q8WVD3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF138Q8WVD3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF138Q8WVD3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF138Q8WVD3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RNF138Q8WVD3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF138Q8WVD3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF138Q8WVD3 AC004854.2-201ENST00000608450 1441 ntBASIC19.44■□□□□ 0.7
RNF138Q8WVD3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RNF138Q8WVD3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF138Q8WVD3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF138Q8WVD3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.44■□□□□ 0.7
RNF138Q8WVD3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.44■□□□□ 0.7
RNF138Q8WVD3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.44■□□□□ 0.7
RNF138Q8WVD3 AC053503.5-201ENST00000601508 636 ntBASIC19.44■□□□□ 0.7
RNF138Q8WVD3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF138Q8WVD3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RNF138Q8WVD3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF138Q8WVD3 AC010542.4-201ENST00000563151 1910 ntBASIC19.44■□□□□ 0.7
RNF138Q8WVD3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
RNF138Q8WVD3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF138Q8WVD3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms