Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RPS4Y2Q8TD47 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS4Y2Q8TD47 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS4Y2Q8TD47 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RPS4Y2Q8TD47 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.73■□□□□ 0.59
RPS4Y2Q8TD47 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RPS4Y2Q8TD47 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.73■□□□□ 0.59
RPS4Y2Q8TD47 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS4Y2Q8TD47 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS4Y2Q8TD47 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RPS4Y2Q8TD47 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.73■□□□□ 0.59
RPS4Y2Q8TD47 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS4Y2Q8TD47 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPS4Y2Q8TD47 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPS4Y2Q8TD47 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS4Y2Q8TD47 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS4Y2Q8TD47 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPS4Y2Q8TD47 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.72■□□□□ 0.59
RPS4Y2Q8TD47 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.72■□□□□ 0.59
RPS4Y2Q8TD47 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.72■□□□□ 0.59
RPS4Y2Q8TD47 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4Y2Q8TD47 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4Y2Q8TD47 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4Y2Q8TD47 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4Y2Q8TD47 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4Y2Q8TD47 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4Y2Q8TD47 AC006455.2-201ENST00000429931 906 ntBASIC18.72■□□□□ 0.59
RPS4Y2Q8TD47 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RPS4Y2Q8TD47 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.72■□□□□ 0.59
RPS4Y2Q8TD47 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4Y2Q8TD47 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4Y2Q8TD47 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.72■□□□□ 0.59
RPS4Y2Q8TD47 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4Y2Q8TD47 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.72■□□□□ 0.59
RPS4Y2Q8TD47 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4Y2Q8TD47 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4Y2Q8TD47 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RPS4Y2Q8TD47 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.71■□□□□ 0.59
RPS4Y2Q8TD47 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RPS4Y2Q8TD47 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.71■□□□□ 0.59
RPS4Y2Q8TD47 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.71■□□□□ 0.59
RPS4Y2Q8TD47 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4Y2Q8TD47 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.71■□□□□ 0.59
RPS4Y2Q8TD47 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.71■□□□□ 0.59
RPS4Y2Q8TD47 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4Y2Q8TD47 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4Y2Q8TD47 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.71■□□□□ 0.59
RPS4Y2Q8TD47 OR2I1P-207ENST00000453522 948 ntBASIC18.71■□□□□ 0.59
RPS4Y2Q8TD47 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.71■□□□□ 0.59
RPS4Y2Q8TD47 pRNA.6-201ENST00000610482 90 ntBASIC18.71■□□□□ 0.59
RPS4Y2Q8TD47 pRNA.5-201ENST00000612139 90 ntBASIC18.71■□□□□ 0.59
RPS4Y2Q8TD47 pRNA.11-201ENST00000618423 90 ntBASIC18.71■□□□□ 0.59
RPS4Y2Q8TD47 pRNA.13-201ENST00000619112 90 ntBASIC18.71■□□□□ 0.59
RPS4Y2Q8TD47 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.71■□□□□ 0.59
RPS4Y2Q8TD47 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4Y2Q8TD47 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4Y2Q8TD47 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPS4Y2Q8TD47 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS4Y2Q8TD47 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS4Y2Q8TD47 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS4Y2Q8TD47 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS4Y2Q8TD47 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS4Y2Q8TD47 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RPS4Y2Q8TD47 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.7■□□□□ 0.58
RPS4Y2Q8TD47 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.7■□□□□ 0.58
RPS4Y2Q8TD47 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RPS4Y2Q8TD47 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.7■□□□□ 0.58
RPS4Y2Q8TD47 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.7■□□□□ 0.58
RPS4Y2Q8TD47 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS4Y2Q8TD47 AL049796.1-201ENST00000565336 1766 ntBASIC18.7■□□□□ 0.58
RPS4Y2Q8TD47 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS4Y2Q8TD47 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS4Y2Q8TD47 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPS4Y2Q8TD47 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RPS4Y2Q8TD47 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS4Y2Q8TD47 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RPS4Y2Q8TD47 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS4Y2Q8TD47 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RPS4Y2Q8TD47 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.69■□□□□ 0.58
RPS4Y2Q8TD47 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS4Y2Q8TD47 TSPY9P-201ENST00000440215 945 ntBASIC18.69■□□□□ 0.58
RPS4Y2Q8TD47 TSPY11P-201ENST00000442607 1045 ntBASIC18.69■□□□□ 0.58
RPS4Y2Q8TD47 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.69■□□□□ 0.58
RPS4Y2Q8TD47 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.69■□□□□ 0.58
RPS4Y2Q8TD47 MIR6724-1-201ENST00000616420 92 ntBASIC18.69■□□□□ 0.58
RPS4Y2Q8TD47 MIR6724-2-201ENST00000616483 92 ntBASIC18.69■□□□□ 0.58
RPS4Y2Q8TD47 MIR6724-4-201ENST00000617390 92 ntBASIC18.69■□□□□ 0.58
RPS4Y2Q8TD47 MIR6724-3-201ENST00000622482 92 ntBASIC18.69■□□□□ 0.58
RPS4Y2Q8TD47 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RPS4Y2Q8TD47 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.69■□□□□ 0.58
RPS4Y2Q8TD47 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.69■□□□□ 0.58
RPS4Y2Q8TD47 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPS4Y2Q8TD47 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.69■□□□□ 0.58
RPS4Y2Q8TD47 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.68■□□□□ 0.58
RPS4Y2Q8TD47 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4Y2Q8TD47 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4Y2Q8TD47 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.68■□□□□ 0.58
RPS4Y2Q8TD47 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.68■□□□□ 0.58
RPS4Y2Q8TD47 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPS4Y2Q8TD47 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms