Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH19Q8TAB3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDH19Q8TAB3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH19Q8TAB3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH19Q8TAB3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
PCDH19Q8TAB3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH19Q8TAB3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH19Q8TAB3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDH19Q8TAB3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDH19Q8TAB3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
PCDH19Q8TAB3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.15■■□□□ 1.14
PCDH19Q8TAB3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH19Q8TAB3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
PCDH19Q8TAB3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
PCDH19Q8TAB3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH19Q8TAB3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
PCDH19Q8TAB3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDH19Q8TAB3 AC244015.2-201ENST00000616358 1861 ntBASIC22.14■■□□□ 1.13
PCDH19Q8TAB3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.14■■□□□ 1.13
PCDH19Q8TAB3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH19Q8TAB3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH19Q8TAB3 AC091305.1-201ENST00000479476 895 ntBASIC22.14■■□□□ 1.13
PCDH19Q8TAB3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH19Q8TAB3 AL034346.1-201ENST00000568244 1277 ntBASIC22.14■■□□□ 1.13
PCDH19Q8TAB3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
PCDH19Q8TAB3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH19Q8TAB3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH19Q8TAB3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH19Q8TAB3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH19Q8TAB3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDH19Q8TAB3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH19Q8TAB3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
PCDH19Q8TAB3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH19Q8TAB3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
PCDH19Q8TAB3 RARRES2P6-201ENST00000567333 442 ntBASIC22.12■■□□□ 1.13
PCDH19Q8TAB3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.12■■□□□ 1.13
PCDH19Q8TAB3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
PCDH19Q8TAB3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDH19Q8TAB3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDH19Q8TAB3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH19Q8TAB3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
PCDH19Q8TAB3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.11■■□□□ 1.13
PCDH19Q8TAB3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDH19Q8TAB3 AC026310.3-201ENST00000625186 2373 ntBASIC22.11■■□□□ 1.13
PCDH19Q8TAB3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.11■■□□□ 1.13
PCDH19Q8TAB3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.11■■□□□ 1.13
PCDH19Q8TAB3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDH19Q8TAB3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDH19Q8TAB3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDH19Q8TAB3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDH19Q8TAB3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH19Q8TAB3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH19Q8TAB3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
PCDH19Q8TAB3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH19Q8TAB3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH19Q8TAB3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.1■■□□□ 1.13
PCDH19Q8TAB3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDH19Q8TAB3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.1■■□□□ 1.13
PCDH19Q8TAB3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PCDH19Q8TAB3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH19Q8TAB3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.1■■□□□ 1.13
PCDH19Q8TAB3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDH19Q8TAB3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDH19Q8TAB3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH19Q8TAB3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.09■■□□□ 1.13
PCDH19Q8TAB3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH19Q8TAB3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.09■■□□□ 1.13
PCDH19Q8TAB3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH19Q8TAB3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.09■■□□□ 1.13
PCDH19Q8TAB3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.09■■□□□ 1.13
PCDH19Q8TAB3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDH19Q8TAB3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.09■■□□□ 1.13
PCDH19Q8TAB3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.09■■□□□ 1.13
PCDH19Q8TAB3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDH19Q8TAB3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
PCDH19Q8TAB3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH19Q8TAB3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDH19Q8TAB3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDH19Q8TAB3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.08■■□□□ 1.13
PCDH19Q8TAB3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH19Q8TAB3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
PCDH19Q8TAB3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH19Q8TAB3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH19Q8TAB3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH19Q8TAB3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH19Q8TAB3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.08■■□□□ 1.13
PCDH19Q8TAB3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH19Q8TAB3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH19Q8TAB3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.08■■□□□ 1.13
PCDH19Q8TAB3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH19Q8TAB3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PCDH19Q8TAB3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.08■■□□□ 1.13
PCDH19Q8TAB3 AC105233.4-201ENST00000642045 216 ntBASIC22.08■■□□□ 1.13
PCDH19Q8TAB3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
PCDH19Q8TAB3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.08■■□□□ 1.12
PCDH19Q8TAB3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDH19Q8TAB3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDH19Q8TAB3 AC003102.1-202ENST00000563394 1796 ntBASIC22.07■■□□□ 1.12
PCDH19Q8TAB3 AP006587.3-201ENST00000525742 1516 ntBASIC22.07■■□□□ 1.12
PCDH19Q8TAB3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms