Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
FBXO39Q8N4B4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
FBXO39Q8N4B4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
FBXO39Q8N4B4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
FBXO39Q8N4B4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.37■■□□□ 1.01
FBXO39Q8N4B4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.37■■□□□ 1.01
FBXO39Q8N4B4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
FBXO39Q8N4B4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
FBXO39Q8N4B4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
FBXO39Q8N4B4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
FBXO39Q8N4B4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
FBXO39Q8N4B4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.36■■□□□ 1.01
FBXO39Q8N4B4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
FBXO39Q8N4B4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
FBXO39Q8N4B4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.36■■□□□ 1.01
FBXO39Q8N4B4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
FBXO39Q8N4B4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
FBXO39Q8N4B4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
FBXO39Q8N4B4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
FBXO39Q8N4B4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
FBXO39Q8N4B4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
FBXO39Q8N4B4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
FBXO39Q8N4B4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
FBXO39Q8N4B4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.35■■□□□ 1.01
FBXO39Q8N4B4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
FBXO39Q8N4B4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
FBXO39Q8N4B4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
FBXO39Q8N4B4 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.35■■□□□ 1.01
FBXO39Q8N4B4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.35■■□□□ 1.01
FBXO39Q8N4B4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
FBXO39Q8N4B4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
FBXO39Q8N4B4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
FBXO39Q8N4B4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.35■■□□□ 1.01
FBXO39Q8N4B4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
FBXO39Q8N4B4 FBXW4P1-201ENST00000426721 2239 ntBASIC21.35■■□□□ 1.01
FBXO39Q8N4B4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.34■■□□□ 1.01
FBXO39Q8N4B4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
FBXO39Q8N4B4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
FBXO39Q8N4B4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
FBXO39Q8N4B4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
FBXO39Q8N4B4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.34■■□□□ 1.01
FBXO39Q8N4B4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
FBXO39Q8N4B4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
FBXO39Q8N4B4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
FBXO39Q8N4B4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.34■■□□□ 1.01
FBXO39Q8N4B4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
FBXO39Q8N4B4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
FBXO39Q8N4B4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
FBXO39Q8N4B4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
FBXO39Q8N4B4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.34■■□□□ 1.01
FBXO39Q8N4B4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.33■■□□□ 1.01
FBXO39Q8N4B4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
FBXO39Q8N4B4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
FBXO39Q8N4B4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
FBXO39Q8N4B4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
FBXO39Q8N4B4 AC004911.1-201ENST00000416316 871 ntBASIC21.33■■□□□ 1.01
FBXO39Q8N4B4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
FBXO39Q8N4B4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.33■■□□□ 1.01
FBXO39Q8N4B4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
FBXO39Q8N4B4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.33■■□□□ 1.01
FBXO39Q8N4B4 CCDC92B-201ENST00000575506 885 ntBASIC21.33■■□□□ 1.01
FBXO39Q8N4B4 AC092437.1-201ENST00000624794 1048 ntBASIC21.33■■□□□ 1.01
FBXO39Q8N4B4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
FBXO39Q8N4B4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.33■■□□□ 1
FBXO39Q8N4B4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.33■■□□□ 1
FBXO39Q8N4B4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
FBXO39Q8N4B4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.32■■□□□ 1
FBXO39Q8N4B4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.32■■□□□ 1
FBXO39Q8N4B4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
FBXO39Q8N4B4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.32■■□□□ 1
FBXO39Q8N4B4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
FBXO39Q8N4B4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.32■■□□□ 1
FBXO39Q8N4B4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.32■■□□□ 1
FBXO39Q8N4B4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.32■■□□□ 1
FBXO39Q8N4B4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
FBXO39Q8N4B4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.32■■□□□ 1
FBXO39Q8N4B4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.32■■□□□ 1
FBXO39Q8N4B4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
FBXO39Q8N4B4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.32■■□□□ 1
FBXO39Q8N4B4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
FBXO39Q8N4B4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.32■■□□□ 1
FBXO39Q8N4B4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.31■■□□□ 1
FBXO39Q8N4B4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
FBXO39Q8N4B4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
FBXO39Q8N4B4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
FBXO39Q8N4B4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.31■■□□□ 1
FBXO39Q8N4B4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
FBXO39Q8N4B4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.31■■□□□ 1
FBXO39Q8N4B4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.31■■□□□ 1
FBXO39Q8N4B4 AC010525.1-201ENST00000585559 441 ntBASIC21.31■■□□□ 1
FBXO39Q8N4B4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
FBXO39Q8N4B4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
FBXO39Q8N4B4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.31■■□□□ 1
FBXO39Q8N4B4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.31■■□□□ 1
FBXO39Q8N4B4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
FBXO39Q8N4B4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
FBXO39Q8N4B4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
FBXO39Q8N4B4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FBXO39Q8N4B4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
FBXO39Q8N4B4 OR2I1P-207ENST00000453522 948 ntBASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms