Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.18■□□□□ 0.82
CCDC116Q8IYX3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC116Q8IYX3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC116Q8IYX3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC116Q8IYX3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC116Q8IYX3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC116Q8IYX3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CCDC116Q8IYX3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
CCDC116Q8IYX3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC116Q8IYX3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC116Q8IYX3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC116Q8IYX3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC116Q8IYX3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC116Q8IYX3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC116Q8IYX3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC116Q8IYX3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CCDC116Q8IYX3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC116Q8IYX3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC116Q8IYX3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC116Q8IYX3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC116Q8IYX3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CCDC116Q8IYX3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC116Q8IYX3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC116Q8IYX3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.16■□□□□ 0.82
CCDC116Q8IYX3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC116Q8IYX3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC116Q8IYX3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC116Q8IYX3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC116Q8IYX3 AL034346.1-201ENST00000568244 1277 ntBASIC20.16■□□□□ 0.82
CCDC116Q8IYX3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC116Q8IYX3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC116Q8IYX3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC116Q8IYX3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC116Q8IYX3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC116Q8IYX3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC116Q8IYX3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CCDC116Q8IYX3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.15■□□□□ 0.82
CCDC116Q8IYX3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC116Q8IYX3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC116Q8IYX3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC116Q8IYX3 AC105233.4-201ENST00000642045 216 ntBASIC20.15■□□□□ 0.82
CCDC116Q8IYX3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC116Q8IYX3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC116Q8IYX3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC116Q8IYX3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC116Q8IYX3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC116Q8IYX3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC116Q8IYX3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC116Q8IYX3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC116Q8IYX3 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.15■□□□□ 0.82
CCDC116Q8IYX3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC116Q8IYX3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC116Q8IYX3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC116Q8IYX3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC116Q8IYX3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC116Q8IYX3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC116Q8IYX3 MIR638-201ENST00000385237 100 ntBASIC20.14■□□□□ 0.81
CCDC116Q8IYX3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC116Q8IYX3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
CCDC116Q8IYX3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC116Q8IYX3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC116Q8IYX3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC116Q8IYX3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC116Q8IYX3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC116Q8IYX3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC116Q8IYX3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC116Q8IYX3 MIR572-201ENST00000384983 95 ntBASIC20.13■□□□□ 0.81
CCDC116Q8IYX3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.13■□□□□ 0.81
CCDC116Q8IYX3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC116Q8IYX3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.13■□□□□ 0.81
CCDC116Q8IYX3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC116Q8IYX3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC116Q8IYX3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
CCDC116Q8IYX3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC116Q8IYX3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC116Q8IYX3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC116Q8IYX3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC116Q8IYX3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC116Q8IYX3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC116Q8IYX3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC116Q8IYX3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC116Q8IYX3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC116Q8IYX3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC116Q8IYX3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.12■□□□□ 0.81
CCDC116Q8IYX3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.12■□□□□ 0.81
CCDC116Q8IYX3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.12■□□□□ 0.81
CCDC116Q8IYX3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC116Q8IYX3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
CCDC116Q8IYX3 CLDN5-201ENST00000403084 2357 ntBASIC20.12■□□□□ 0.81
CCDC116Q8IYX3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC116Q8IYX3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC116Q8IYX3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC116Q8IYX3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC116Q8IYX3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC116Q8IYX3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC116Q8IYX3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC116Q8IYX3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.11■□□□□ 0.81
CCDC116Q8IYX3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.11■□□□□ 0.81
CCDC116Q8IYX3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC116Q8IYX3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms