Protein–RNA interactions for Protein: Q86YC2

PALB2, Partner and localizer of BRCA2, humanhuman

Predictions only

Length 1,186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2Q86YC2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.35■■□□□ 1.33
PALB2Q86YC2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.35■■□□□ 1.33
PALB2Q86YC2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.35■■□□□ 1.33
PALB2Q86YC2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.35■■□□□ 1.33
PALB2Q86YC2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
PALB2Q86YC2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PALB2Q86YC2 AC092053.2-201ENST00000640557 1818 ntBASIC23.35■■□□□ 1.33
PALB2Q86YC2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PALB2Q86YC2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PALB2Q86YC2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PALB2Q86YC2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PALB2Q86YC2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PALB2Q86YC2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
PALB2Q86YC2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
PALB2Q86YC2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PALB2Q86YC2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PALB2Q86YC2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PALB2Q86YC2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.34■■□□□ 1.33
PALB2Q86YC2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PALB2Q86YC2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.34■■□□□ 1.33
PALB2Q86YC2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.34■■□□□ 1.33
PALB2Q86YC2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PALB2Q86YC2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PALB2Q86YC2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PALB2Q86YC2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PALB2Q86YC2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PALB2Q86YC2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.33■■□□□ 1.33
PALB2Q86YC2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.33■■□□□ 1.33
PALB2Q86YC2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PALB2Q86YC2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
PALB2Q86YC2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.33■■□□□ 1.33
PALB2Q86YC2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PALB2Q86YC2 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PALB2Q86YC2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.33■■□□□ 1.33
PALB2Q86YC2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.33■■□□□ 1.33
PALB2Q86YC2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.33■■□□□ 1.33
PALB2Q86YC2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.33■■□□□ 1.33
PALB2Q86YC2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
PALB2Q86YC2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PALB2Q86YC2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PALB2Q86YC2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PALB2Q86YC2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.33■■□□□ 1.32
PALB2Q86YC2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
PALB2Q86YC2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PALB2Q86YC2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PALB2Q86YC2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
PALB2Q86YC2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.32■■□□□ 1.32
PALB2Q86YC2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PALB2Q86YC2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PALB2Q86YC2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PALB2Q86YC2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.31■■□□□ 1.32
PALB2Q86YC2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PALB2Q86YC2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PALB2Q86YC2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PALB2Q86YC2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.31■■□□□ 1.32
PALB2Q86YC2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.31■■□□□ 1.32
PALB2Q86YC2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.31■■□□□ 1.32
PALB2Q86YC2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.31■■□□□ 1.32
PALB2Q86YC2 C11orf96-202ENST00000528572 1834 ntBASIC23.31■■□□□ 1.32
PALB2Q86YC2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.31■■□□□ 1.32
PALB2Q86YC2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PALB2Q86YC2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
PALB2Q86YC2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.3■■□□□ 1.32
PALB2Q86YC2 KRT18P61-201ENST00000585825 1298 ntBASIC23.3■■□□□ 1.32
PALB2Q86YC2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PALB2Q86YC2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PALB2Q86YC2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PALB2Q86YC2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PALB2Q86YC2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PALB2Q86YC2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.29■■□□□ 1.32
PALB2Q86YC2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.29■■□□□ 1.32
PALB2Q86YC2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PALB2Q86YC2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.29■■□□□ 1.32
PALB2Q86YC2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.29■■□□□ 1.32
PALB2Q86YC2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.29■■□□□ 1.32
PALB2Q86YC2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.29■■□□□ 1.32
PALB2Q86YC2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.29■■□□□ 1.32
PALB2Q86YC2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PALB2Q86YC2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
PALB2Q86YC2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.29■■□□□ 1.32
PALB2Q86YC2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PALB2Q86YC2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PALB2Q86YC2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PALB2Q86YC2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.28■■□□□ 1.32
PALB2Q86YC2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PALB2Q86YC2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PALB2Q86YC2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.28■■□□□ 1.32
PALB2Q86YC2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.28■■□□□ 1.32
PALB2Q86YC2 TPRG1LP1-201ENST00000598702 760 ntBASIC23.28■■□□□ 1.32
PALB2Q86YC2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.28■■□□□ 1.32
PALB2Q86YC2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PALB2Q86YC2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
PALB2Q86YC2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PALB2Q86YC2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PALB2Q86YC2 ID1-201ENST00000376105 1233 ntBASIC23.27■■□□□ 1.32
PALB2Q86YC2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PALB2Q86YC2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PALB2Q86YC2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.27■■□□□ 1.32
PALB2Q86YC2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.27■■□□□ 1.32
PALB2Q86YC2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms