Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.45■□□□□ 0.7
ATG4DQ86TL0 AC007375.3-201ENST00000600936 2314 ntBASIC19.45■□□□□ 0.7
ATG4DQ86TL0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATG4DQ86TL0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
ATG4DQ86TL0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATG4DQ86TL0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
ATG4DQ86TL0 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.45■□□□□ 0.7
ATG4DQ86TL0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.45■□□□□ 0.7
ATG4DQ86TL0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.45■□□□□ 0.7
ATG4DQ86TL0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
ATG4DQ86TL0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.45■□□□□ 0.7
ATG4DQ86TL0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATG4DQ86TL0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATG4DQ86TL0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATG4DQ86TL0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATG4DQ86TL0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATG4DQ86TL0 RASA4CP-201ENST00000424092 1398 ntBASIC19.44■□□□□ 0.7
ATG4DQ86TL0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATG4DQ86TL0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.44■□□□□ 0.7
ATG4DQ86TL0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATG4DQ86TL0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATG4DQ86TL0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATG4DQ86TL0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ATG4DQ86TL0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATG4DQ86TL0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ATG4DQ86TL0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATG4DQ86TL0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATG4DQ86TL0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.44■□□□□ 0.7
ATG4DQ86TL0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.44■□□□□ 0.7
ATG4DQ86TL0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATG4DQ86TL0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.43■□□□□ 0.7
ATG4DQ86TL0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ATG4DQ86TL0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATG4DQ86TL0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATG4DQ86TL0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.43■□□□□ 0.7
ATG4DQ86TL0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATG4DQ86TL0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATG4DQ86TL0 RARRES2P6-201ENST00000567333 442 ntBASIC19.43■□□□□ 0.7
ATG4DQ86TL0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.43■□□□□ 0.7
ATG4DQ86TL0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ATG4DQ86TL0 TSPY26P-201ENST00000476365 1326 ntBASIC19.43■□□□□ 0.7
ATG4DQ86TL0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATG4DQ86TL0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.43■□□□□ 0.7
ATG4DQ86TL0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ATG4DQ86TL0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATG4DQ86TL0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATG4DQ86TL0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ATG4DQ86TL0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATG4DQ86TL0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATG4DQ86TL0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.42■□□□□ 0.7
ATG4DQ86TL0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATG4DQ86TL0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATG4DQ86TL0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATG4DQ86TL0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.42■□□□□ 0.7
ATG4DQ86TL0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ATG4DQ86TL0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ATG4DQ86TL0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATG4DQ86TL0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATG4DQ86TL0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATG4DQ86TL0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATG4DQ86TL0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATG4DQ86TL0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ATG4DQ86TL0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.41■□□□□ 0.7
ATG4DQ86TL0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATG4DQ86TL0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.41■□□□□ 0.7
ATG4DQ86TL0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATG4DQ86TL0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.41■□□□□ 0.7
ATG4DQ86TL0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATG4DQ86TL0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.41■□□□□ 0.7
ATG4DQ86TL0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.41■□□□□ 0.7
ATG4DQ86TL0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.41■□□□□ 0.7
ATG4DQ86TL0 AC104564.3-201ENST00000582367 638 ntBASIC19.41■□□□□ 0.7
ATG4DQ86TL0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.41■□□□□ 0.7
ATG4DQ86TL0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.41■□□□□ 0.7
ATG4DQ86TL0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
ATG4DQ86TL0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATG4DQ86TL0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATG4DQ86TL0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATG4DQ86TL0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATG4DQ86TL0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.4■□□□□ 0.7
ATG4DQ86TL0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ATG4DQ86TL0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ATG4DQ86TL0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.4■□□□□ 0.7
ATG4DQ86TL0 AC026271.2-201ENST00000428091 497 ntBASIC19.4■□□□□ 0.7
ATG4DQ86TL0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATG4DQ86TL0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATG4DQ86TL0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.4■□□□□ 0.7
ATG4DQ86TL0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATG4DQ86TL0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ATG4DQ86TL0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.39■□□□□ 0.7
ATG4DQ86TL0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATG4DQ86TL0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
ATG4DQ86TL0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ATG4DQ86TL0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATG4DQ86TL0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.39■□□□□ 0.69
ATG4DQ86TL0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATG4DQ86TL0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.39■□□□□ 0.69
ATG4DQ86TL0 AP006587.3-201ENST00000525742 1516 ntBASIC19.39■□□□□ 0.69
ATG4DQ86TL0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATG4DQ86TL0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms