Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST2H2AA3Q6FI13 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST2H2AA3Q6FI13 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST2H2AA3Q6FI13 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST2H2AA3Q6FI13 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.68■□□□□ 0.9
HIST2H2AA3Q6FI13 FBXW4P1-201ENST00000426721 2239 ntBASIC20.68■□□□□ 0.9
HIST2H2AA3Q6FI13 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST2H2AA3Q6FI13 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
HIST2H2AA3Q6FI13 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST2H2AA3Q6FI13 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST2H2AA3Q6FI13 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST2H2AA3Q6FI13 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
HIST2H2AA3Q6FI13 MIR939-201ENST00000401314 82 ntBASIC20.67■□□□□ 0.9
HIST2H2AA3Q6FI13 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HIST2H2AA3Q6FI13 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HIST2H2AA3Q6FI13 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.67■□□□□ 0.9
HIST2H2AA3Q6FI13 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST2H2AA3Q6FI13 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HIST2H2AA3Q6FI13 TSPY26P-201ENST00000476365 1326 ntBASIC20.67■□□□□ 0.9
HIST2H2AA3Q6FI13 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST2H2AA3Q6FI13 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.67■□□□□ 0.9
HIST2H2AA3Q6FI13 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST2H2AA3Q6FI13 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST2H2AA3Q6FI13 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
HIST2H2AA3Q6FI13 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.66■□□□□ 0.9
HIST2H2AA3Q6FI13 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIST2H2AA3Q6FI13 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
HIST2H2AA3Q6FI13 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIST2H2AA3Q6FI13 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HIST2H2AA3Q6FI13 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIST2H2AA3Q6FI13 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.66■□□□□ 0.9
HIST2H2AA3Q6FI13 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIST2H2AA3Q6FI13 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
HIST2H2AA3Q6FI13 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIST2H2AA3Q6FI13 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIST2H2AA3Q6FI13 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIST2H2AA3Q6FI13 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIST2H2AA3Q6FI13 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HIST2H2AA3Q6FI13 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.65■□□□□ 0.9
HIST2H2AA3Q6FI13 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIST2H2AA3Q6FI13 AL136967.2-201ENST00000623968 743 ntBASIC20.65■□□□□ 0.9
HIST2H2AA3Q6FI13 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HIST2H2AA3Q6FI13 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.64■□□□□ 0.9
HIST2H2AA3Q6FI13 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.64■□□□□ 0.89
HIST2H2AA3Q6FI13 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIST2H2AA3Q6FI13 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIST2H2AA3Q6FI13 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.64■□□□□ 0.89
HIST2H2AA3Q6FI13 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.64■□□□□ 0.89
HIST2H2AA3Q6FI13 SMUG1P1-201ENST00000590640 811 ntBASIC20.64■□□□□ 0.89
HIST2H2AA3Q6FI13 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.64■□□□□ 0.89
HIST2H2AA3Q6FI13 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIST2H2AA3Q6FI13 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIST2H2AA3Q6FI13 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.64■□□□□ 0.89
HIST2H2AA3Q6FI13 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
HIST2H2AA3Q6FI13 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.64■□□□□ 0.89
HIST2H2AA3Q6FI13 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIST2H2AA3Q6FI13 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
HIST2H2AA3Q6FI13 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST2H2AA3Q6FI13 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST2H2AA3Q6FI13 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HIST2H2AA3Q6FI13 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.63■□□□□ 0.89
HIST2H2AA3Q6FI13 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST2H2AA3Q6FI13 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.63■□□□□ 0.89
HIST2H2AA3Q6FI13 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST2H2AA3Q6FI13 AC142381.2-201ENST00000566120 298 ntBASIC20.63■□□□□ 0.89
HIST2H2AA3Q6FI13 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.63■□□□□ 0.89
HIST2H2AA3Q6FI13 AL031432.3-201ENST00000607698 485 ntBASIC20.63■□□□□ 0.89
HIST2H2AA3Q6FI13 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.63■□□□□ 0.89
HIST2H2AA3Q6FI13 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
HIST2H2AA3Q6FI13 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HIST2H2AA3Q6FI13 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HIST2H2AA3Q6FI13 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
HIST2H2AA3Q6FI13 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
HIST2H2AA3Q6FI13 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
HIST2H2AA3Q6FI13 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.62■□□□□ 0.89
HIST2H2AA3Q6FI13 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST2H2AA3Q6FI13 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
HIST2H2AA3Q6FI13 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST2H2AA3Q6FI13 SUDS3P1-201ENST00000505831 966 ntBASIC20.62■□□□□ 0.89
HIST2H2AA3Q6FI13 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.62■□□□□ 0.89
HIST2H2AA3Q6FI13 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.62■□□□□ 0.89
HIST2H2AA3Q6FI13 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.62■□□□□ 0.89
HIST2H2AA3Q6FI13 AC104564.3-201ENST00000582367 638 ntBASIC20.62■□□□□ 0.89
HIST2H2AA3Q6FI13 AC105233.4-201ENST00000642045 216 ntBASIC20.62■□□□□ 0.89
HIST2H2AA3Q6FI13 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST2H2AA3Q6FI13 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
HIST2H2AA3Q6FI13 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.62■□□□□ 0.89
HIST2H2AA3Q6FI13 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.62■□□□□ 0.89
HIST2H2AA3Q6FI13 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST2H2AA3Q6FI13 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
HIST2H2AA3Q6FI13 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST2H2AA3Q6FI13 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST2H2AA3Q6FI13 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HIST2H2AA3Q6FI13 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST2H2AA3Q6FI13 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST2H2AA3Q6FI13 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST2H2AA3Q6FI13 AC010542.4-201ENST00000563151 1910 ntBASIC20.61■□□□□ 0.89
HIST2H2AA3Q6FI13 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.61■□□□□ 0.89
HIST2H2AA3Q6FI13 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HIST2H2AA3Q6FI13 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms