Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC26.05■■□□□ 1.76
RFX7Q2KHR2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RFX7Q2KHR2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
RFX7Q2KHR2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RFX7Q2KHR2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RFX7Q2KHR2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC26.05■■□□□ 1.76
RFX7Q2KHR2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RFX7Q2KHR2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
RFX7Q2KHR2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
RFX7Q2KHR2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RFX7Q2KHR2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC26.04■■□□□ 1.76
RFX7Q2KHR2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RFX7Q2KHR2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RFX7Q2KHR2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RFX7Q2KHR2 DBI-210ENST00000542275 757 ntTSL 5 BASIC26.04■■□□□ 1.76
RFX7Q2KHR2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC26.04■■□□□ 1.76
RFX7Q2KHR2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC26.04■■□□□ 1.76
RFX7Q2KHR2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC26.04■■□□□ 1.76
RFX7Q2KHR2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC26.04■■□□□ 1.76
RFX7Q2KHR2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RFX7Q2KHR2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RFX7Q2KHR2 C11orf96-202ENST00000528572 1834 ntBASIC26.03■■□□□ 1.76
RFX7Q2KHR2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RFX7Q2KHR2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
RFX7Q2KHR2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC26.03■■□□□ 1.76
RFX7Q2KHR2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RFX7Q2KHR2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC26.03■■□□□ 1.76
RFX7Q2KHR2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC26.03■■□□□ 1.76
RFX7Q2KHR2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC26.03■■□□□ 1.76
RFX7Q2KHR2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
RFX7Q2KHR2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC26.03■■□□□ 1.76
RFX7Q2KHR2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC26.03■■□□□ 1.76
RFX7Q2KHR2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
RFX7Q2KHR2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC26.03■■□□□ 1.76
RFX7Q2KHR2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC26.02■■□□□ 1.76
RFX7Q2KHR2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RFX7Q2KHR2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC26.02■■□□□ 1.76
RFX7Q2KHR2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RFX7Q2KHR2 COX20-201ENST00000366528 568 ntTSL 2 BASIC26.02■■□□□ 1.76
RFX7Q2KHR2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC26.02■■□□□ 1.76
RFX7Q2KHR2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC26.02■■□□□ 1.76
RFX7Q2KHR2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC26.02■■□□□ 1.76
RFX7Q2KHR2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RFX7Q2KHR2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC26.02■■□□□ 1.76
RFX7Q2KHR2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC26.02■■□□□ 1.76
RFX7Q2KHR2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RFX7Q2KHR2 EP400NL-214ENST00000641289 2402 ntBASIC26.01■■□□□ 1.76
RFX7Q2KHR2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RFX7Q2KHR2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
RFX7Q2KHR2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RFX7Q2KHR2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RFX7Q2KHR2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RFX7Q2KHR2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RFX7Q2KHR2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC26.01■■□□□ 1.75
RFX7Q2KHR2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RFX7Q2KHR2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC26.01■■□□□ 1.75
RFX7Q2KHR2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC26.01■■□□□ 1.75
RFX7Q2KHR2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC26.01■■□□□ 1.75
RFX7Q2KHR2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC26■■□□□ 1.75
RFX7Q2KHR2 FAM99A-202ENST00000538190 1989 ntBASIC26■■□□□ 1.75
RFX7Q2KHR2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC26■■□□□ 1.75
RFX7Q2KHR2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC26■■□□□ 1.75
RFX7Q2KHR2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
RFX7Q2KHR2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC26■■□□□ 1.75
RFX7Q2KHR2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC26■■□□□ 1.75
RFX7Q2KHR2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RFX7Q2KHR2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
RFX7Q2KHR2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RFX7Q2KHR2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC26■■□□□ 1.75
RFX7Q2KHR2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC26■■□□□ 1.75
RFX7Q2KHR2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
RFX7Q2KHR2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RFX7Q2KHR2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC25.99■■□□□ 1.75
RFX7Q2KHR2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
RFX7Q2KHR2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RFX7Q2KHR2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC25.99■■□□□ 1.75
RFX7Q2KHR2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RFX7Q2KHR2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RFX7Q2KHR2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RFX7Q2KHR2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC25.99■■□□□ 1.75
RFX7Q2KHR2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RFX7Q2KHR2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
RFX7Q2KHR2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
RFX7Q2KHR2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC25.98■■□□□ 1.75
RFX7Q2KHR2 AC137761.2-201ENST00000561729 223 ntBASIC25.98■■□□□ 1.75
RFX7Q2KHR2 AC145350.3-201ENST00000569033 163 ntBASIC25.98■■□□□ 1.75
RFX7Q2KHR2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RFX7Q2KHR2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC25.98■■□□□ 1.75
RFX7Q2KHR2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC25.98■■□□□ 1.75
RFX7Q2KHR2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC25.98■■□□□ 1.75
RFX7Q2KHR2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RFX7Q2KHR2 AP004607.7-201ENST00000527152 1677 ntBASIC25.97■■□□□ 1.75
RFX7Q2KHR2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RFX7Q2KHR2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC25.97■■□□□ 1.75
RFX7Q2KHR2 ID1-201ENST00000376105 1233 ntBASIC25.97■■□□□ 1.75
RFX7Q2KHR2 AC073111.5-205ENST00000641717 521 ntBASIC25.97■■□□□ 1.75
RFX7Q2KHR2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC25.97■■□□□ 1.75
RFX7Q2KHR2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RFX7Q2KHR2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC25.97■■□□□ 1.75
RFX7Q2KHR2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms