Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
YBX1P67809 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.91■□□□□ 0.94
YBX1P67809 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
YBX1P67809 AC079089.2-201ENST00000531211 1277 ntBASIC20.91■□□□□ 0.94
YBX1P67809 FAM99A-202ENST00000538190 1989 ntBASIC20.91■□□□□ 0.94
YBX1P67809 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.91■□□□□ 0.94
YBX1P67809 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.91■□□□□ 0.94
YBX1P67809 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
YBX1P67809 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
YBX1P67809 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
YBX1P67809 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
YBX1P67809 IRS3P-201ENST00000223076 1006 ntBASIC20.9■□□□□ 0.94
YBX1P67809 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
YBX1P67809 MIR572-201ENST00000384983 95 ntBASIC20.9■□□□□ 0.94
YBX1P67809 AC087239.1-201ENST00000622671 572 ntBASIC20.9■□□□□ 0.94
YBX1P67809 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.9■□□□□ 0.94
YBX1P67809 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
YBX1P67809 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
YBX1P67809 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.9■□□□□ 0.94
YBX1P67809 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
YBX1P67809 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.9■□□□□ 0.94
YBX1P67809 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.89■□□□□ 0.94
YBX1P67809 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.89■□□□□ 0.94
YBX1P67809 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
YBX1P67809 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
YBX1P67809 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
YBX1P67809 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
YBX1P67809 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.89■□□□□ 0.93
YBX1P67809 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
YBX1P67809 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.89■□□□□ 0.93
YBX1P67809 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
YBX1P67809 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.89■□□□□ 0.93
YBX1P67809 SMUG1P1-201ENST00000590640 811 ntBASIC20.89■□□□□ 0.93
YBX1P67809 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
YBX1P67809 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.89■□□□□ 0.93
YBX1P67809 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
YBX1P67809 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
YBX1P67809 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
YBX1P67809 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.88■□□□□ 0.93
YBX1P67809 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
YBX1P67809 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
YBX1P67809 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
YBX1P67809 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
YBX1P67809 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
YBX1P67809 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
YBX1P67809 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
YBX1P67809 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
YBX1P67809 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.88■□□□□ 0.93
YBX1P67809 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
YBX1P67809 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
YBX1P67809 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.88■□□□□ 0.93
YBX1P67809 MIR6084-201ENST00000622012 110 ntBASIC20.88■□□□□ 0.93
YBX1P67809 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
YBX1P67809 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
YBX1P67809 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
YBX1P67809 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
YBX1P67809 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
YBX1P67809 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
YBX1P67809 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
YBX1P67809 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
YBX1P67809 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
YBX1P67809 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.87■□□□□ 0.93
YBX1P67809 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.87■□□□□ 0.93
YBX1P67809 MIR935-201ENST00000401179 91 ntBASIC20.87■□□□□ 0.93
YBX1P67809 AC105233.4-201ENST00000642045 216 ntBASIC20.87■□□□□ 0.93
YBX1P67809 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
YBX1P67809 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.87■□□□□ 0.93
YBX1P67809 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
YBX1P67809 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
YBX1P67809 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
YBX1P67809 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.86■□□□□ 0.93
YBX1P67809 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
YBX1P67809 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
YBX1P67809 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
YBX1P67809 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
YBX1P67809 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
YBX1P67809 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
YBX1P67809 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.86■□□□□ 0.93
YBX1P67809 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.86■□□□□ 0.93
YBX1P67809 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.86■□□□□ 0.93
YBX1P67809 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.86■□□□□ 0.93
YBX1P67809 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.86■□□□□ 0.93
YBX1P67809 AC005229.4-201ENST00000610085 2198 ntBASIC20.86■□□□□ 0.93
YBX1P67809 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
YBX1P67809 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.86■□□□□ 0.93
YBX1P67809 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
YBX1P67809 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
YBX1P67809 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
YBX1P67809 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
YBX1P67809 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
YBX1P67809 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.85■□□□□ 0.93
YBX1P67809 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
YBX1P67809 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.85■□□□□ 0.93
YBX1P67809 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
YBX1P67809 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
YBX1P67809 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.85■□□□□ 0.93
YBX1P67809 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
YBX1P67809 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
YBX1P67809 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
YBX1P67809 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms