Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 HSP78YDR258C 2436 nt5.66□□□□□ -1.5
CAF120P53836 VAN1YML115C 1608 nt5.66□□□□□ -1.5
CAF120P53836 ARB1YER036C 1833 nt5.65□□□□□ -1.5
CAF120P53836 HIR1YBL008W 2523 nt5.65□□□□□ -1.5
CAF120P53836 YCL065WYCL065W 369 nt5.65□□□□□ -1.5
CAF120P53836 YDL187CYDL187C 330 nt5.65□□□□□ -1.5
CAF120P53836 SDH6YDR379C-A 240 nt5.65□□□□□ -1.5
CAF120P53836 YEL053W-AYEL053W-A 348 nt5.65□□□□□ -1.5
CAF120P53836 YGR176WYGR176W 348 nt5.65□□□□□ -1.5
CAF120P53836 YKL131WYKL131W 522 nt5.65□□□□□ -1.5
CAF120P53836 RPL13BYMR142C 600 nt5.65□□□□□ -1.5
CAF120P53836 ATP11YNL315C 957 nt5.65□□□□□ -1.5
CAF120P53836 TLC1TLC1 1301 nt5.65□□□□□ -1.51
CAF120P53836 LYS9YNR050C 1341 nt5.65□□□□□ -1.51
CAF120P53836 YKL075CYKL075C 1353 nt5.65□□□□□ -1.51
CAF120P53836 MEC3YLR288C 1425 nt5.65□□□□□ -1.51
CAF120P53836 YRA1YDR381W 681 nt5.64□□□□□ -1.51
CAF120P53836 YER148W-AYER148W-A 579 nt5.64□□□□□ -1.51
CAF120P53836 RPS2YGL123W 765 nt5.64□□□□□ -1.51
CAF120P53836 YIR023C-AYIR023C-A 324 nt5.64□□□□□ -1.51
CAF120P53836 YAL004WYAL004W 648 nt5.64□□□□□ -1.51
CAF120P53836 YKL033W-AYKL033W-A 711 nt5.64□□□□□ -1.51
CAF120P53836 NHP6BYBR089C-A 300 nt5.64□□□□□ -1.51
CAF120P53836 YBR126W-AYBR126W-A 207 nt5.64□□□□□ -1.51
CAF120P53836 YAP1801YHR161C 1914 nt5.64□□□□□ -1.51
CAF120P53836 NDC1YML031W 1968 nt5.64□□□□□ -1.51
CAF120P53836 TIP20YGL145W 2106 nt5.63□□□□□ -1.51
CAF120P53836 SEO1YAL067C 1782 nt5.63□□□□□ -1.51
CAF120P53836 YDR391CYDR391C 699 nt5.63□□□□□ -1.51
CAF120P53836 YEL077W-AYEL077W-A 483 nt5.63□□□□□ -1.51
CAF120P53836 PRO3YER023W 861 nt5.63□□□□□ -1.51
CAF120P53836 SLO1YER180C-A 258 nt5.63□□□□□ -1.51
CAF120P53836 YER190C-BYER190C-B 483 nt5.63□□□□□ -1.51
CAF120P53836 YFL068WYFL068W 483 nt5.63□□□□□ -1.51
CAF120P53836 CDC43YGL155W 1131 nt5.63□□□□□ -1.51
CAF120P53836 YGR035CYGR035C 351 nt5.63□□□□□ -1.51
CAF120P53836 YGR296C-BYGR296C-B 483 nt5.63□□□□□ -1.51
CAF120P53836 YHL050W-AYHL050W-A 483 nt5.63□□□□□ -1.51
CAF120P53836 YHR219C-AYHR219C-A 483 nt5.63□□□□□ -1.51
CAF120P53836 DJP1YIR004W 1299 nt5.63□□□□□ -1.51
CAF120P53836 YLL066W-AYLL066W-A 483 nt5.63□□□□□ -1.51
CAF120P53836 YLL067W-AYLL067W-A 483 nt5.63□□□□□ -1.51
CAF120P53836 YLR466C-AYLR466C-A 483 nt5.63□□□□□ -1.51
CAF120P53836 YLR467C-AYLR467C-A 483 nt5.63□□□□□ -1.51
CAF120P53836 YML133W-BYML133W-B 483 nt5.63□□□□□ -1.51
CAF120P53836 RAD14YMR201C 1116 nt5.63□□□□□ -1.51
CAF120P53836 YNL339W-BYNL339W-B 483 nt5.63□□□□□ -1.51
CAF120P53836 YBL113W-AYBL113W-A 483 nt5.63□□□□□ -1.51
CAF120P53836 YOR396C-AYOR396C-A 483 nt5.63□□□□□ -1.51
CAF120P53836 YPL283W-BYPL283W-B 483 nt5.63□□□□□ -1.51
CAF120P53836 YPR099CYPR099C 357 nt5.63□□□□□ -1.51
CAF120P53836 YPR204C-AYPR204C-A 483 nt5.63□□□□□ -1.51
CAF120P53836 snR54snR54 86 nt5.63□□□□□ -1.51
CAF120P53836 DIA3YDL024C 1407 nt5.63□□□□□ -1.51
CAF120P53836 CLB1YGR108W 1416 nt5.63□□□□□ -1.51
CAF120P53836 RAD28YDR030C 1521 nt5.63□□□□□ -1.51
CAF120P53836 YTA12YMR089C 2478 nt5.63□□□□□ -1.51
CAF120P53836 SNF12YNR023W 1701 nt5.62□□□□□ -1.51
CAF120P53836 YIL025CYIL025C 375 nt5.62□□□□□ -1.51
CAF120P53836 SMA2YML066C 1110 nt5.62□□□□□ -1.51
CAF120P53836 HHT2YNL031C 411 nt5.62□□□□□ -1.51
CAF120P53836 YNR034W-AYNR034W-A 297 nt5.62□□□□□ -1.51
CAF120P53836 RPS9AYPL081W 594 nt5.62□□□□□ -1.51
CAF120P53836 MBA1YBR185C 837 nt5.62□□□□□ -1.51
CAF120P53836 snR48snR48 113 nt5.62□□□□□ -1.51
CAF120P53836 XKS1YGR194C 1803 nt5.62□□□□□ -1.51
CAF120P53836 AFR1YDR085C 1863 nt5.62□□□□□ -1.51
CAF120P53836 YDR109CYDR109C 2148 nt5.62□□□□□ -1.51
CAF120P53836 STM1YLR150W 822 nt5.61□□□□□ -1.51
CAF120P53836 NOP56YLR197W 1515 nt5.61□□□□□ -1.51
CAF120P53836 ATP14YLR295C 375 nt5.61□□□□□ -1.51
CAF120P53836 BET5YML077W 480 nt5.61□□□□□ -1.51
CAF120P53836 PUB1YNL016W 1362 nt5.61□□□□□ -1.51
CAF120P53836 KEX2YNL238W 2445 nt5.61□□□□□ -1.51
CAF120P53836 PKC1YBL105C 3456 nt5.61□□□□□ -1.51
CAF120P53836 HES1YOR237W 1305 nt5.61□□□□□ -1.51
CAF120P53836 APE3YBR286W 1614 nt5.61□□□□□ -1.51
CAF120P53836 GUA1YMR217W 1578 nt5.6□□□□□ -1.51
CAF120P53836 UBP6YFR010W 1500 nt5.6□□□□□ -1.51
CAF120P53836 RCM1YNL022C 1473 nt5.6□□□□□ -1.51
CAF120P53836 YCR101CYCR101C 549 nt5.6□□□□□ -1.51
CAF120P53836 YFL051CYFL051C 483 nt5.6□□□□□ -1.51
CAF120P53836 MIG2YGL209W 1149 nt5.6□□□□□ -1.51
CAF120P53836 SPL2YHR136C 447 nt5.6□□□□□ -1.51
CAF120P53836 LSM8YJR022W 330 nt5.6□□□□□ -1.51
CAF120P53836 BNA1YJR025C 534 nt5.6□□□□□ -1.51
CAF120P53836 AIM29YKR074W 468 nt5.6□□□□□ -1.51
CAF120P53836 CDC33YOL139C 642 nt5.6□□□□□ -1.51
CAF120P53836 YPL276WYPL276W 438 nt5.6□□□□□ -1.51
CAF120P53836 ERV15YBR210W 429 nt5.6□□□□□ -1.51
CAF120P53836 YBR230W-AYBR230W-A 201 nt5.6□□□□□ -1.51
CAF120P53836 CTP1YBR291C 900 nt5.6□□□□□ -1.51
CAF120P53836 YRF1-4YLR466W 4149 nt5.59□□□□□ -1.51
CAF120P53836 ATP1YBL099W 1638 nt5.59□□□□□ -1.51
CAF120P53836 THR4YCR053W 1545 nt5.59□□□□□ -1.51
CAF120P53836 YIR007WYIR007W 2295 nt5.59□□□□□ -1.51
CAF120P53836 AYT1YLL063C 1425 nt5.59□□□□□ -1.51
CAF120P53836 RPL35BYDL136W 363 nt5.59□□□□□ -1.51
CAF120P53836 CDC12YHR107C 1224 nt5.59□□□□□ -1.51
CAF120P53836 EFB1YAL003W 621 nt5.59□□□□□ -1.51
Retrieved 100 of 7,029 protein–RNA pairs in 18.1 ms