Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.96■□□□□ 0.79
SMSP52788 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMSP52788 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.96■□□□□ 0.79
SMSP52788 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.96■□□□□ 0.79
SMSP52788 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMSP52788 IGHV3-19-201ENST00000521488 291 ntBASIC19.96■□□□□ 0.79
SMSP52788 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.96■□□□□ 0.79
SMSP52788 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.96■□□□□ 0.79
SMSP52788 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMSP52788 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.96■□□□□ 0.79
SMSP52788 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMSP52788 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SMSP52788 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.96■□□□□ 0.79
SMSP52788 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMSP52788 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMSP52788 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMSP52788 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMSP52788 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMSP52788 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMSP52788 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.95■□□□□ 0.78
SMSP52788 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMSP52788 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMSP52788 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMSP52788 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMSP52788 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMSP52788 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.95■□□□□ 0.78
SMSP52788 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
SMSP52788 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.95■□□□□ 0.78
SMSP52788 AL354811.1-201ENST00000610286 706 ntBASIC19.95■□□□□ 0.78
SMSP52788 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.95■□□□□ 0.78
SMSP52788 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.95■□□□□ 0.78
SMSP52788 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SMSP52788 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMSP52788 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.95■□□□□ 0.78
SMSP52788 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMSP52788 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMSP52788 FP325331.1-202ENST00000623531 1380 ntBASIC19.95■□□□□ 0.78
SMSP52788 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMSP52788 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMSP52788 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SMSP52788 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SMSP52788 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
SMSP52788 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.94■□□□□ 0.78
SMSP52788 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMSP52788 MIR572-201ENST00000384983 95 ntBASIC19.94■□□□□ 0.78
SMSP52788 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMSP52788 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.94■□□□□ 0.78
SMSP52788 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SMSP52788 DUX4L2-201ENST00000561772 1275 ntBASIC19.94■□□□□ 0.78
SMSP52788 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.94■□□□□ 0.78
SMSP52788 DUX4L6-201ENST00000626483 1275 ntBASIC19.94■□□□□ 0.78
SMSP52788 DUX4L1-201ENST00000627662 1275 ntBASIC19.94■□□□□ 0.78
SMSP52788 DUX4L8-201ENST00000629013 1275 ntBASIC19.94■□□□□ 0.78
SMSP52788 DUX4L3-201ENST00000630187 1275 ntBASIC19.94■□□□□ 0.78
SMSP52788 DUX4L7-201ENST00000630678 1275 ntBASIC19.94■□□□□ 0.78
SMSP52788 DUX4L5-201ENST00000630834 1275 ntBASIC19.94■□□□□ 0.78
SMSP52788 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMSP52788 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMSP52788 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.94■□□□□ 0.78
SMSP52788 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.94■□□□□ 0.78
SMSP52788 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SMSP52788 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SMSP52788 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMSP52788 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.93■□□□□ 0.78
SMSP52788 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMSP52788 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SMSP52788 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.93■□□□□ 0.78
SMSP52788 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMSP52788 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SMSP52788 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.93■□□□□ 0.78
SMSP52788 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SMSP52788 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SMSP52788 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMSP52788 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMSP52788 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.93■□□□□ 0.78
SMSP52788 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.93■□□□□ 0.78
SMSP52788 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.93■□□□□ 0.78
SMSP52788 AL031602.1-201ENST00000633169 911 ntBASIC19.93■□□□□ 0.78
SMSP52788 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMSP52788 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
SMSP52788 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMSP52788 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMSP52788 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMSP52788 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMSP52788 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMSP52788 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMSP52788 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMSP52788 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMSP52788 AC012414.1-201ENST00000556676 535 ntBASIC19.92■□□□□ 0.78
SMSP52788 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.92■□□□□ 0.78
SMSP52788 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SMSP52788 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.92■□□□□ 0.78
SMSP52788 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMSP52788 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.92■□□□□ 0.78
SMSP52788 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMSP52788 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMSP52788 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMSP52788 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.92■□□□□ 0.78
SMSP52788 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.92■□□□□ 0.78
SMSP52788 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms