Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSR2P43308 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.43■□□□□ 0.86
SSR2P43308 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SSR2P43308 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.43■□□□□ 0.86
SSR2P43308 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.43■□□□□ 0.86
SSR2P43308 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SSR2P43308 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SSR2P43308 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SSR2P43308 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSR2P43308 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SSR2P43308 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSR2P43308 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSR2P43308 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.43■□□□□ 0.86
SSR2P43308 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SSR2P43308 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSR2P43308 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSR2P43308 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SSR2P43308 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.42■□□□□ 0.86
SSR2P43308 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SSR2P43308 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SSR2P43308 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SSR2P43308 AC105265.2-201ENST00000467189 838 ntBASIC20.42■□□□□ 0.86
SSR2P43308 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.42■□□□□ 0.86
SSR2P43308 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SSR2P43308 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.42■□□□□ 0.86
SSR2P43308 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SSR2P43308 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SSR2P43308 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
SSR2P43308 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSR2P43308 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.41■□□□□ 0.86
SSR2P43308 FBXW4P1-201ENST00000426721 2239 ntBASIC20.41■□□□□ 0.86
SSR2P43308 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSR2P43308 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSR2P43308 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.41■□□□□ 0.86
SSR2P43308 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSR2P43308 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.41■□□□□ 0.86
SSR2P43308 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.41■□□□□ 0.86
SSR2P43308 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSR2P43308 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSR2P43308 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SSR2P43308 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SSR2P43308 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSR2P43308 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.4■□□□□ 0.86
SSR2P43308 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSR2P43308 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SSR2P43308 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SSR2P43308 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SSR2P43308 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.4■□□□□ 0.86
SSR2P43308 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SSR2P43308 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.4■□□□□ 0.86
SSR2P43308 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.4■□□□□ 0.86
SSR2P43308 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SSR2P43308 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.4■□□□□ 0.86
SSR2P43308 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
SSR2P43308 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
SSR2P43308 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.39■□□□□ 0.86
SSR2P43308 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.39■□□□□ 0.86
SSR2P43308 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SSR2P43308 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SSR2P43308 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.39■□□□□ 0.85
SSR2P43308 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SSR2P43308 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SSR2P43308 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SSR2P43308 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.39■□□□□ 0.85
SSR2P43308 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SSR2P43308 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.38■□□□□ 0.85
SSR2P43308 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SSR2P43308 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SSR2P43308 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SSR2P43308 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SSR2P43308 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.38■□□□□ 0.85
SSR2P43308 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
SSR2P43308 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.38■□□□□ 0.85
SSR2P43308 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SSR2P43308 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SSR2P43308 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SSR2P43308 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SSR2P43308 AC010542.4-201ENST00000563151 1910 ntBASIC20.37■□□□□ 0.85
SSR2P43308 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SSR2P43308 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.37■□□□□ 0.85
SSR2P43308 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSR2P43308 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSR2P43308 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.36■□□□□ 0.85
SSR2P43308 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSR2P43308 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSR2P43308 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSR2P43308 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSR2P43308 AC026471.6-201ENST00000622954 1905 ntBASIC20.36■□□□□ 0.85
SSR2P43308 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSR2P43308 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSR2P43308 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.36■□□□□ 0.85
SSR2P43308 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.36■□□□□ 0.85
SSR2P43308 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.36■□□□□ 0.85
SSR2P43308 AC012414.1-201ENST00000556676 535 ntBASIC20.36■□□□□ 0.85
SSR2P43308 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.36■□□□□ 0.85
SSR2P43308 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SSR2P43308 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.36■□□□□ 0.85
SSR2P43308 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.36■□□□□ 0.85
SSR2P43308 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
SSR2P43308 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms