Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 RDN58-2RDN58-2 158 nt3.03□□□□□ -1.92
CDC40P40968 RRP40YOL142W 723 nt3.03□□□□□ -1.92
CDC40P40968 YOL166CYOL166C 339 nt3.03□□□□□ -1.92
CDC40P40968 PRM4YPL156C 855 nt3.03□□□□□ -1.92
CDC40P40968 SUT2YPR009W 807 nt3.03□□□□□ -1.92
CDC40P40968 RAD5YLR032W 3510 nt3.03□□□□□ -1.92
CDC40P40968 RIT1YMR283C 1542 nt3.03□□□□□ -1.92
CDC40P40968 STU1YBL034C 4542 nt3.02□□□□□ -1.93
CDC40P40968 DAN4YJR151C 3486 nt3.02□□□□□ -1.93
CDC40P40968 MSR1YHR091C 1932 nt3.02□□□□□ -1.93
CDC40P40968 HTA1YDR225W 399 nt3.02□□□□□ -1.93
CDC40P40968 SPT3YDR392W 1014 nt3.02□□□□□ -1.93
CDC40P40968 PXR1YGR280C 816 nt3.02□□□□□ -1.93
CDC40P40968 SDP1YIL113W 630 nt3.02□□□□□ -1.93
CDC40P40968 YVH1YIR026C 1095 nt3.02□□□□□ -1.93
CDC40P40968 YIR040CYIR040C 333 nt3.02□□□□□ -1.93
CDC40P40968 RPS28BYLR264W 204 nt3.02□□□□□ -1.93
CDC40P40968 SYC1YOR179C 567 nt3.02□□□□□ -1.93
CDC40P40968 SPH1YLR313C 1593 nt3.02□□□□□ -1.93
CDC40P40968 FLO9YAL063C 3969 nt3.02□□□□□ -1.93
CDC40P40968 TAF1YGR274C 3201 nt3.02□□□□□ -1.93
CDC40P40968 MSK1YNL073W 1731 nt3.02□□□□□ -1.93
CDC40P40968 WHI3YNL197C 1986 nt3.01□□□□□ -1.93
CDC40P40968 TRS120YDR407C 3870 nt3.01□□□□□ -1.93
CDC40P40968 YCR024C-BYCR024C-B 267 nt3.01□□□□□ -1.93
CDC40P40968 YEL075CYEL075C 369 nt3.01□□□□□ -1.93
CDC40P40968 YGR161W-CYGR161W-C 279 nt3.01□□□□□ -1.93
CDC40P40968 YHR097CYHR097C 1101 nt3.01□□□□□ -1.93
CDC40P40968 YLR154C-HYLR154C-H 132 nt3.01□□□□□ -1.93
CDC40P40968 YLR156C-AYLR156C-A 132 nt3.01□□□□□ -1.93
CDC40P40968 YLR157C-CYLR157C-C 132 nt3.01□□□□□ -1.93
CDC40P40968 YLR159C-AYLR159C-A 132 nt3.01□□□□□ -1.93
CDC40P40968 RPS10BYMR230W 318 nt3.01□□□□□ -1.93
CDC40P40968 YNL184CYNL184C 327 nt3.01□□□□□ -1.93
CDC40P40968 FIG1YBR040W 897 nt3.01□□□□□ -1.93
CDC40P40968 ATG5YPL149W 885 nt3.01□□□□□ -1.93
CDC40P40968 RER1YCL001W 567 nt3.01□□□□□ -1.93
CDC40P40968 EMP70YLR083C 2004 nt3.01□□□□□ -1.93
CDC40P40968 MET5YJR137C 4329 nt3□□□□□ -1.93
CDC40P40968 STT4YLR305C 5703 nt3□□□□□ -1.93
CDC40P40968 REG1YDR028C 3045 nt3□□□□□ -1.93
CDC40P40968 SPC105YGL093W 2754 nt3□□□□□ -1.93
CDC40P40968 NKP1YDR383C 717 nt3□□□□□ -1.93
CDC40P40968 ARI1YGL157W 1044 nt3□□□□□ -1.93
CDC40P40968 RPS4BYHR203C 786 nt3□□□□□ -1.93
CDC40P40968 YJR128WYJR128W 360 nt3□□□□□ -1.93
CDC40P40968 YKL162CYKL162C 1209 nt3□□□□□ -1.93
CDC40P40968 SHH3YMR118C 591 nt3□□□□□ -1.93
CDC40P40968 DUG3YNL191W 1074 nt3□□□□□ -1.93
CDC40P40968 EXO70YJL085W 1872 nt3□□□□□ -1.93
CDC40P40968 STP2YHR006W 1626 nt3□□□□□ -1.93
CDC40P40968 CDH1YGL003C 1701 nt2.99□□□□□ -1.93
CDC40P40968 VMA5YKL080W 1179 nt2.99□□□□□ -1.93
CDC40P40968 OMA1YKR087C 1038 nt2.99□□□□□ -1.93
CDC40P40968 YLL047WYLL047W 384 nt2.99□□□□□ -1.93
CDC40P40968 RNH203YLR154C 333 nt2.99□□□□□ -1.93
CDC40P40968 YBL028CYBL028C 321 nt2.99□□□□□ -1.93
CDC40P40968 HHF2YNL030W 312 nt2.99□□□□□ -1.93
CDC40P40968 TIF4631YGR162W 2859 nt2.99□□□□□ -1.93
CDC40P40968 SEC27YGL137W 2670 nt2.99□□□□□ -1.93
CDC40P40968 RED1YLR263W 2484 nt2.99□□□□□ -1.93
CDC40P40968 SOK1YDR006C 2706 nt2.99□□□□□ -1.93
CDC40P40968 SPA2YLL021W 4401 nt2.99□□□□□ -1.93
CDC40P40968 DUN1YDL101C 1542 nt2.98□□□□□ -1.93
CDC40P40968 YMR018WYMR018W 1545 nt2.98□□□□□ -1.93
CDC40P40968 PSP1YDR505C 2526 nt2.98□□□□□ -1.93
CDC40P40968 BCH1YMR237W 2175 nt2.98□□□□□ -1.93
CDC40P40968 GIS4YML006C 2325 nt2.98□□□□□ -1.93
CDC40P40968 SPP382YLR424W 2127 nt2.98□□□□□ -1.93
CDC40P40968 YPS7YDR349C 1791 nt2.98□□□□□ -1.93
CDC40P40968 YDL050CYDL050C 372 nt2.98□□□□□ -1.93
CDC40P40968 RNH202YDR279W 1053 nt2.98□□□□□ -1.93
CDC40P40968 MAG1YER142C 891 nt2.98□□□□□ -1.93
CDC40P40968 YKR011CYKR011C 1062 nt2.98□□□□□ -1.93
CDC40P40968 PSY3YLR376C 729 nt2.98□□□□□ -1.93
CDC40P40968 YNR062CYNR062C 984 nt2.98□□□□□ -1.93
CDC40P40968 KAR5YMR065W 1515 nt2.98□□□□□ -1.93
CDC40P40968 ENA5YDR038C 3276 nt2.97□□□□□ -1.93
CDC40P40968 ENA2YDR039C 3276 nt2.97□□□□□ -1.93
CDC40P40968 ENA1YDR040C 3276 nt2.97□□□□□ -1.93
CDC40P40968 RPN6YDL097C 1305 nt2.97□□□□□ -1.93
CDC40P40968 RRI1YDL216C 1323 nt2.97□□□□□ -1.93
CDC40P40968 ERG9YHR190W 1335 nt2.97□□□□□ -1.93
CDC40P40968 PSY4YBL046W 1326 nt2.97□□□□□ -1.93
CDC40P40968 RRP5YMR229C 5190 nt2.97□□□□□ -1.93
CDC40P40968 SLI1YGR212W 1407 nt2.97□□□□□ -1.93
CDC40P40968 ENT5YDR153C 1236 nt2.97□□□□□ -1.93
CDC40P40968 THO1YER063W 657 nt2.97□□□□□ -1.93
CDC40P40968 ECO1YFR027W 846 nt2.97□□□□□ -1.93
CDC40P40968 YGL006W-AYGL006W-A 111 nt2.97□□□□□ -1.93
CDC40P40968 PET54YGR222W 882 nt2.97□□□□□ -1.93
CDC40P40968 YKL156C-AYKL156C-A 117 nt2.97□□□□□ -1.93
CDC40P40968 SSN8YNL025C 972 nt2.97□□□□□ -1.93
CDC40P40968 YNL181WYNL181W 1224 nt2.97□□□□□ -1.93
CDC40P40968 IZH4YOL101C 939 nt2.97□□□□□ -1.93
CDC40P40968 YOR062CYOR062C 807 nt2.97□□□□□ -1.93
CDC40P40968 SAS5YOR213C 747 nt2.97□□□□□ -1.93
CDC40P40968 OSW1YOR255W 837 nt2.97□□□□□ -1.93
CDC40P40968 DUF1YOL087C 3351 nt2.97□□□□□ -1.93
CDC40P40968 TCB3YML072C 4638 nt2.97□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 21.1 ms