Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THBS4P35443 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.81■□□□□ 0.6
THBS4P35443 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THBS4P35443 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.81■□□□□ 0.6
THBS4P35443 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.81■□□□□ 0.6
THBS4P35443 AL358852.1-201ENST00000623174 1268 ntBASIC18.81■□□□□ 0.6
THBS4P35443 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
THBS4P35443 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THBS4P35443 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
THBS4P35443 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THBS4P35443 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THBS4P35443 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THBS4P35443 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
THBS4P35443 FBXW4P1-201ENST00000426721 2239 ntBASIC18.8■□□□□ 0.6
THBS4P35443 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
THBS4P35443 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
THBS4P35443 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.8■□□□□ 0.6
THBS4P35443 AC010141.3-201ENST00000456659 717 ntBASIC18.8■□□□□ 0.6
THBS4P35443 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.8■□□□□ 0.6
THBS4P35443 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
THBS4P35443 AC012414.1-201ENST00000556676 535 ntBASIC18.8■□□□□ 0.6
THBS4P35443 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
THBS4P35443 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.8■□□□□ 0.6
THBS4P35443 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.8■□□□□ 0.6
THBS4P35443 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.8■□□□□ 0.6
THBS4P35443 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THBS4P35443 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
THBS4P35443 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
THBS4P35443 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
THBS4P35443 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THBS4P35443 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.79■□□□□ 0.6
THBS4P35443 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.79■□□□□ 0.6
THBS4P35443 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THBS4P35443 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
THBS4P35443 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
THBS4P35443 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.79■□□□□ 0.6
THBS4P35443 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THBS4P35443 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.79■□□□□ 0.6
THBS4P35443 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
THBS4P35443 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.79■□□□□ 0.6
THBS4P35443 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THBS4P35443 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.79■□□□□ 0.6
THBS4P35443 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.79■□□□□ 0.6
THBS4P35443 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.79■□□□□ 0.6
THBS4P35443 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
THBS4P35443 MIR6821-201ENST00000617625 74 ntBASIC18.79■□□□□ 0.6
THBS4P35443 MIR6084-201ENST00000622012 110 ntBASIC18.79■□□□□ 0.6
THBS4P35443 AC105233.4-201ENST00000642045 216 ntBASIC18.79■□□□□ 0.6
THBS4P35443 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THBS4P35443 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
THBS4P35443 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.79■□□□□ 0.6
THBS4P35443 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.79■□□□□ 0.6
THBS4P35443 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THBS4P35443 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
THBS4P35443 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
THBS4P35443 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
THBS4P35443 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THBS4P35443 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
THBS4P35443 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.78■□□□□ 0.6
THBS4P35443 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.78■□□□□ 0.6
THBS4P35443 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
THBS4P35443 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THBS4P35443 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.78■□□□□ 0.6
THBS4P35443 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THBS4P35443 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THBS4P35443 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THBS4P35443 AC097381.1-201ENST00000429019 1296 ntBASIC18.78■□□□□ 0.6
THBS4P35443 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.78■□□□□ 0.6
THBS4P35443 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.78■□□□□ 0.6
THBS4P35443 AL354811.1-201ENST00000610286 706 ntBASIC18.78■□□□□ 0.6
THBS4P35443 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
THBS4P35443 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THBS4P35443 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.78■□□□□ 0.6
THBS4P35443 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THBS4P35443 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
THBS4P35443 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
THBS4P35443 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THBS4P35443 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THBS4P35443 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
THBS4P35443 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
THBS4P35443 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.77■□□□□ 0.6
THBS4P35443 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THBS4P35443 AC087623.3-201ENST00000607047 1098 ntBASIC18.77■□□□□ 0.6
THBS4P35443 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.77■□□□□ 0.6
THBS4P35443 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
THBS4P35443 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.77■□□□□ 0.6
THBS4P35443 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
THBS4P35443 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
THBS4P35443 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
THBS4P35443 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
THBS4P35443 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
THBS4P35443 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
THBS4P35443 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
THBS4P35443 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
THBS4P35443 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
THBS4P35443 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
THBS4P35443 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
THBS4P35443 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.76■□□□□ 0.59
THBS4P35443 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
THBS4P35443 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms