Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd40P27512 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd40P27512 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cd40P27512 Gm8495-201ENSMUST00000188740 694 ntBASIC17.11■□□□□ 0.33
Cd40P27512 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.11■□□□□ 0.33
Cd40P27512 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd40P27512 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd40P27512 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd40P27512 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd40P27512 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd40P27512 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.1■□□□□ 0.33
Cd40P27512 Gm13534-201ENSMUST00000121169 513 ntBASIC17.1■□□□□ 0.33
Cd40P27512 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd40P27512 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd40P27512 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd40P27512 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cd40P27512 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd40P27512 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd40P27512 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd40P27512 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd40P27512 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd40P27512 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cd40P27512 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd40P27512 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd40P27512 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.09■□□□□ 0.33
Cd40P27512 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cd40P27512 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cd40P27512 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd40P27512 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd40P27512 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd40P27512 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cd40P27512 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cd40P27512 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cd40P27512 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cd40P27512 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
Cd40P27512 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd40P27512 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.08■□□□□ 0.32
Cd40P27512 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.08■□□□□ 0.32
Cd40P27512 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd40P27512 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd40P27512 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd40P27512 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Cd40P27512 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd40P27512 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd40P27512 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
Cd40P27512 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd40P27512 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd40P27512 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd40P27512 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd40P27512 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd40P27512 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd40P27512 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd40P27512 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cd40P27512 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd40P27512 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd40P27512 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cd40P27512 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.06■□□□□ 0.32
Cd40P27512 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd40P27512 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd40P27512 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd40P27512 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd40P27512 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd40P27512 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.06■□□□□ 0.32
Cd40P27512 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd40P27512 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd40P27512 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cd40P27512 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cd40P27512 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.06■□□□□ 0.32
Cd40P27512 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Cd40P27512 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd40P27512 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd40P27512 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd40P27512 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd40P27512 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd40P27512 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd40P27512 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd40P27512 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd40P27512 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd40P27512 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd40P27512 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cd40P27512 AV356131-201ENSMUST00000206201 750 ntBASIC17.05■□□□□ 0.32
Cd40P27512 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cd40P27512 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd40P27512 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cd40P27512 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cd40P27512 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd40P27512 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd40P27512 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd40P27512 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd40P27512 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd40P27512 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd40P27512 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd40P27512 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.04■□□□□ 0.32
Cd40P27512 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cd40P27512 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cd40P27512 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd40P27512 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Cd40P27512 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cd40P27512 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd40P27512 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms