Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP11P24347 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.34■□□□□ 0.85
MMP11P24347 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP11P24347 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MMP11P24347 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MMP11P24347 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP11P24347 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP11P24347 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.34■□□□□ 0.85
MMP11P24347 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MMP11P24347 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.34■□□□□ 0.85
MMP11P24347 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.34■□□□□ 0.85
MMP11P24347 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.34■□□□□ 0.85
MMP11P24347 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
MMP11P24347 RARRES2P11-201ENST00000635158 484 ntBASIC20.34■□□□□ 0.85
MMP11P24347 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.34■□□□□ 0.85
MMP11P24347 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.34■□□□□ 0.85
MMP11P24347 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MMP11P24347 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
MMP11P24347 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.33■□□□□ 0.85
MMP11P24347 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
MMP11P24347 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.33■□□□□ 0.85
MMP11P24347 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
MMP11P24347 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MMP11P24347 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.33■□□□□ 0.85
MMP11P24347 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MMP11P24347 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
MMP11P24347 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
MMP11P24347 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MMP11P24347 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
MMP11P24347 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MMP11P24347 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MMP11P24347 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP11P24347 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
MMP11P24347 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP11P24347 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP11P24347 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
MMP11P24347 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MMP11P24347 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MMP11P24347 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP11P24347 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP11P24347 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.32■□□□□ 0.84
MMP11P24347 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.32■□□□□ 0.84
MMP11P24347 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.32■□□□□ 0.84
MMP11P24347 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
MMP11P24347 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MMP11P24347 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP11P24347 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP11P24347 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP11P24347 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MMP11P24347 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.31■□□□□ 0.84
MMP11P24347 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.31■□□□□ 0.84
MMP11P24347 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MMP11P24347 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP11P24347 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP11P24347 AC139530.1-201ENST00000575312 1977 ntBASIC20.3■□□□□ 0.84
MMP11P24347 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP11P24347 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.3■□□□□ 0.84
MMP11P24347 AC004911.1-201ENST00000416316 871 ntBASIC20.3■□□□□ 0.84
MMP11P24347 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.3■□□□□ 0.84
MMP11P24347 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.3■□□□□ 0.84
MMP11P24347 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.3■□□□□ 0.84
MMP11P24347 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.3■□□□□ 0.84
MMP11P24347 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.3■□□□□ 0.84
MMP11P24347 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.3■□□□□ 0.84
MMP11P24347 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP11P24347 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.3■□□□□ 0.84
MMP11P24347 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.3■□□□□ 0.84
MMP11P24347 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MMP11P24347 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MMP11P24347 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MMP11P24347 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MMP11P24347 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP11P24347 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP11P24347 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP11P24347 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MMP11P24347 AC090192.1-201ENST00000517740 490 ntBASIC20.29■□□□□ 0.84
MMP11P24347 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
MMP11P24347 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.29■□□□□ 0.84
MMP11P24347 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP11P24347 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
MMP11P24347 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.29■□□□□ 0.84
MMP11P24347 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP11P24347 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP11P24347 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP11P24347 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP11P24347 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP11P24347 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.29■□□□□ 0.84
MMP11P24347 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP11P24347 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MMP11P24347 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
MMP11P24347 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.29■□□□□ 0.84
MMP11P24347 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MMP11P24347 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
MMP11P24347 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MMP11P24347 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.28■□□□□ 0.84
MMP11P24347 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MMP11P24347 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.28■□□□□ 0.84
MMP11P24347 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.28■□□□□ 0.84
MMP11P24347 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.28■□□□□ 0.84
MMP11P24347 KRT18P61-201ENST00000585825 1298 ntBASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms