Protein–RNA interactions for Protein: P23643

VPS3, Vacuolar protein sorting-associated protein 3, yeastyeast

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS3P23643 SNQ2YDR011W 4506 nt3.28□□□□□ -1.88
VPS3P23643 SPO14YKR031C 5052 nt3.28□□□□□ -1.88
VPS3P23643 ROM1YGR070W 3468 nt3.28□□□□□ -1.88
VPS3P23643 UBP5YER144C 2418 nt3.28□□□□□ -1.89
VPS3P23643 ALG8YOR067C 1734 nt3.27□□□□□ -1.89
VPS3P23643 GIS4YML006C 2325 nt3.27□□□□□ -1.89
VPS3P23643 YIG1YPL201C 1386 nt3.27□□□□□ -1.89
VPS3P23643 STP2YHR006W 1626 nt3.27□□□□□ -1.89
VPS3P23643 CSR2YPR030W 3366 nt3.27□□□□□ -1.89
VPS3P23643 RPL1BYGL135W 654 nt3.27□□□□□ -1.89
VPS3P23643 RPN1YHR027C 2982 nt3.27□□□□□ -1.89
VPS3P23643 ARC15YIL062C 465 nt3.27□□□□□ -1.89
VPS3P23643 RPS21BYJL136C 264 nt3.27□□□□□ -1.89
VPS3P23643 RPL17AYKL180W 555 nt3.27□□□□□ -1.89
VPS3P23643 YBL039W-BYBL039W-B 180 nt3.27□□□□□ -1.89
VPS3P23643 TUM1YOR251C 915 nt3.27□□□□□ -1.89
VPS3P23643 TPK2YPL203W 1143 nt3.27□□□□□ -1.89
VPS3P23643 RPL1AYPL220W 654 nt3.27□□□□□ -1.89
VPS3P23643 USV1YPL230W 1176 nt3.27□□□□□ -1.89
VPS3P23643 YBR089WYBR089W 600 nt3.27□□□□□ -1.89
VPS3P23643 YIL082W-AYIL082W-A 4497 nt3.27□□□□□ -1.89
VPS3P23643 PBS2YJL128C 2007 nt3.27□□□□□ -1.89
VPS3P23643 RGC1YPR115W 3252 nt3.27□□□□□ -1.89
VPS3P23643 TPD3YAL016W 1908 nt3.27□□□□□ -1.89
VPS3P23643 CDC40YDR364C 1368 nt3.26□□□□□ -1.89
VPS3P23643 SDP1YIL113W 630 nt3.26□□□□□ -1.89
VPS3P23643 YIR014WYIR014W 729 nt3.26□□□□□ -1.89
VPS3P23643 MRPL49YJL096W 486 nt3.26□□□□□ -1.89
VPS3P23643 AIM25YJR100C 984 nt3.26□□□□□ -1.89
VPS3P23643 MTD1YKR080W 963 nt3.26□□□□□ -1.89
VPS3P23643 RPL15AYLR029C 615 nt3.26□□□□□ -1.89
VPS3P23643 RLP7YNL002C 969 nt3.26□□□□□ -1.89
VPS3P23643 TEC1YBR083W 1461 nt3.26□□□□□ -1.89
VPS3P23643 TFC1YBR123C 1950 nt3.25□□□□□ -1.89
VPS3P23643 YDL176WYDL176W 2127 nt3.25□□□□□ -1.89
VPS3P23643 SIZ1YDR409W 2715 nt3.25□□□□□ -1.89
VPS3P23643 POL31YJR006W 1464 nt3.25□□□□□ -1.89
VPS3P23643 DET1YDR051C 1005 nt3.25□□□□□ -1.89
VPS3P23643 YER165C-AYER165C-A 357 nt3.25□□□□□ -1.89
VPS3P23643 RNH203YLR154C 333 nt3.25□□□□□ -1.89
VPS3P23643 PBA1YLR199C 831 nt3.25□□□□□ -1.89
VPS3P23643 RHO5YNL180C 996 nt3.25□□□□□ -1.89
VPS3P23643 SEC15YGL233W 2733 nt3.25□□□□□ -1.89
VPS3P23643 VBA4YDR119W 2307 nt3.25□□□□□ -1.89
VPS3P23643 NDC80YIL144W 2076 nt3.24□□□□□ -1.89
VPS3P23643 KTR6YPL053C 1341 nt3.24□□□□□ -1.89
VPS3P23643 YDL180WYDL180W 1644 nt3.24□□□□□ -1.89
VPS3P23643 YDL162CYDL162C 357 nt3.24□□□□□ -1.89
VPS3P23643 PPH3YDR075W 927 nt3.24□□□□□ -1.89
VPS3P23643 BMH2YDR099W 822 nt3.24□□□□□ -1.89
VPS3P23643 YOL050CYOL050C 321 nt3.24□□□□□ -1.89
VPS3P23643 TAF14YPL129W 735 nt3.24□□□□□ -1.89
VPS3P23643 YPR136CYPR136C 513 nt3.24□□□□□ -1.89
VPS3P23643 MET10YFR030W 3108 nt3.24□□□□□ -1.89
VPS3P23643 DSL1YNL258C 2265 nt3.24□□□□□ -1.89
VPS3P23643 CHO2YGR157W 2610 nt3.23□□□□□ -1.89
VPS3P23643 RIF1YBR275C 5751 nt3.23□□□□□ -1.89
VPS3P23643 YPR148CYPR148C 1308 nt3.23□□□□□ -1.89
VPS3P23643 YGR237CYGR237C 2358 nt3.23□□□□□ -1.89
VPS3P23643 FLO1YAR050W 4614 nt3.23□□□□□ -1.89
VPS3P23643 MRH1YDR033W 963 nt3.23□□□□□ -1.89
VPS3P23643 GRX3YDR098C 858 nt3.23□□□□□ -1.89
VPS3P23643 TLG1YDR468C 675 nt3.23□□□□□ -1.89
VPS3P23643 NSA2YER126C 786 nt3.23□□□□□ -1.89
VPS3P23643 KXD1YGL079W 657 nt3.23□□□□□ -1.89
VPS3P23643 YTA7YGR270W 4140 nt3.23□□□□□ -1.89
VPS3P23643 IME1YJR094C 1083 nt3.23□□□□□ -1.89
VPS3P23643 RPL8BYLL045C 771 nt3.23□□□□□ -1.89
VPS3P23643 YLR416CYLR416C 399 nt3.23□□□□□ -1.89
VPS3P23643 YBL065WYBL065W 345 nt3.23□□□□□ -1.89
VPS3P23643 DBP5YOR046C 1449 nt3.23□□□□□ -1.89
VPS3P23643 YOR314WYOR314W 330 nt3.23□□□□□ -1.89
VPS3P23643 YBR096WYBR096W 693 nt3.23□□□□□ -1.89
VPS3P23643 MDV1YJL112W 2145 nt3.23□□□□□ -1.89
VPS3P23643 SPO71YDR104C 3738 nt3.23□□□□□ -1.89
VPS3P23643 XRN1YGL173C 4587 nt3.23□□□□□ -1.89
VPS3P23643 TIF4631YGR162W 2859 nt3.22□□□□□ -1.89
VPS3P23643 HMS1YOR032C 1305 nt3.22□□□□□ -1.89
VPS3P23643 CLB5YPR120C 1308 nt3.22□□□□□ -1.89
VPS3P23643 RRP8YDR083W 1179 nt3.22□□□□□ -1.89
VPS3P23643 YLR225CYLR225C 1224 nt3.22□□□□□ -1.89
VPS3P23643 CSM3YMR048W 954 nt3.22□□□□□ -1.89
VPS3P23643 SSN8YNL025C 972 nt3.22□□□□□ -1.89
VPS3P23643 VPS17YOR132W 1656 nt3.22□□□□□ -1.89
VPS3P23643 BUD4YJR092W 4344 nt3.22□□□□□ -1.89
VPS3P23643 SAS4YDR181C 1446 nt3.21□□□□□ -1.9
VPS3P23643 TGL2YDR058C 981 nt3.21□□□□□ -1.9
VPS3P23643 TOS8YGL096W 831 nt3.21□□□□□ -1.9
VPS3P23643 PIR1YKL164C 1026 nt3.21□□□□□ -1.9
VPS3P23643 YNL013CYNL013C 378 nt3.21□□□□□ -1.9
VPS3P23643 RUF5-1RUF5-1 710 nt3.21□□□□□ -1.9
VPS3P23643 RUF5-2RUF5-2 710 nt3.21□□□□□ -1.9
VPS3P23643 CMD1YBR109C 444 nt3.21□□□□□ -1.9
VPS3P23643 EPL1YFL024C 2499 nt3.21□□□□□ -1.9
VPS3P23643 SNT1YCR033W 3681 nt3.21□□□□□ -1.9
VPS3P23643 SMC2YFR031C 3513 nt3.2□□□□□ -1.9
VPS3P23643 RAD7YJR052W 1698 nt3.2□□□□□ -1.9
VPS3P23643 VAS1YGR094W 3315 nt3.2□□□□□ -1.9
VPS3P23643 YDR442WYDR442W 393 nt3.2□□□□□ -1.9
VPS3P23643 BET1YIL004C 429 nt3.2□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 24.7 ms