Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 AP006587.3-201ENST00000525742 1516 ntBASIC19.67■□□□□ 0.74
RPS4Y1P22090 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RPS4Y1P22090 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPS4Y1P22090 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.67■□□□□ 0.74
RPS4Y1P22090 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.67■□□□□ 0.74
RPS4Y1P22090 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.67■□□□□ 0.74
RPS4Y1P22090 AC008764.7-201ENST00000593779 1081 ntBASIC19.67■□□□□ 0.74
RPS4Y1P22090 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.67■□□□□ 0.74
RPS4Y1P22090 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.67■□□□□ 0.74
RPS4Y1P22090 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPS4Y1P22090 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPS4Y1P22090 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPS4Y1P22090 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPS4Y1P22090 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RPS4Y1P22090 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPS4Y1P22090 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPS4Y1P22090 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPS4Y1P22090 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPS4Y1P22090 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPS4Y1P22090 AC003102.1-202ENST00000563394 1796 ntBASIC19.66■□□□□ 0.74
RPS4Y1P22090 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.66■□□□□ 0.74
RPS4Y1P22090 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.66■□□□□ 0.74
RPS4Y1P22090 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.66■□□□□ 0.74
RPS4Y1P22090 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.66■□□□□ 0.74
RPS4Y1P22090 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.66■□□□□ 0.74
RPS4Y1P22090 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPS4Y1P22090 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPS4Y1P22090 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.66■□□□□ 0.74
RPS4Y1P22090 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RPS4Y1P22090 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.66■□□□□ 0.74
RPS4Y1P22090 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.66■□□□□ 0.74
RPS4Y1P22090 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RPS4Y1P22090 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.66■□□□□ 0.74
RPS4Y1P22090 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPS4Y1P22090 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPS4Y1P22090 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.66■□□□□ 0.74
RPS4Y1P22090 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RPS4Y1P22090 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPS4Y1P22090 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPS4Y1P22090 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPS4Y1P22090 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPS4Y1P22090 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.65■□□□□ 0.74
RPS4Y1P22090 MIR939-201ENST00000401314 82 ntBASIC19.65■□□□□ 0.74
RPS4Y1P22090 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPS4Y1P22090 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RPS4Y1P22090 AL031432.3-201ENST00000607698 485 ntBASIC19.65■□□□□ 0.74
RPS4Y1P22090 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RPS4Y1P22090 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPS4Y1P22090 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.65■□□□□ 0.74
RPS4Y1P22090 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.74
RPS4Y1P22090 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RPS4Y1P22090 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
RPS4Y1P22090 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
RPS4Y1P22090 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPS4Y1P22090 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.64■□□□□ 0.73
RPS4Y1P22090 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPS4Y1P22090 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RPS4Y1P22090 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.64■□□□□ 0.73
RPS4Y1P22090 AL355001.2-201ENST00000620617 1191 ntBASIC19.64■□□□□ 0.73
RPS4Y1P22090 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.64■□□□□ 0.73
RPS4Y1P22090 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.64■□□□□ 0.73
RPS4Y1P22090 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPS4Y1P22090 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RPS4Y1P22090 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPS4Y1P22090 AL137060.1-201ENST00000618151 2648 ntBASIC19.63■□□□□ 0.73
RPS4Y1P22090 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS4Y1P22090 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS4Y1P22090 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.63■□□□□ 0.73
RPS4Y1P22090 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPS4Y1P22090 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS4Y1P22090 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS4Y1P22090 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS4Y1P22090 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS4Y1P22090 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS4Y1P22090 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.63■□□□□ 0.73
RPS4Y1P22090 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.63■□□□□ 0.73
RPS4Y1P22090 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS4Y1P22090 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RPS4Y1P22090 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.63■□□□□ 0.73
RPS4Y1P22090 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.63■□□□□ 0.73
RPS4Y1P22090 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4Y1P22090 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.62■□□□□ 0.73
RPS4Y1P22090 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.62■□□□□ 0.73
RPS4Y1P22090 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.62■□□□□ 0.73
RPS4Y1P22090 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4Y1P22090 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4Y1P22090 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.62■□□□□ 0.73
RPS4Y1P22090 RASA4CP-201ENST00000424092 1398 ntBASIC19.62■□□□□ 0.73
RPS4Y1P22090 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.62■□□□□ 0.73
RPS4Y1P22090 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4Y1P22090 TSPY26P-201ENST00000476365 1326 ntBASIC19.62■□□□□ 0.73
RPS4Y1P22090 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
RPS4Y1P22090 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4Y1P22090 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.62■□□□□ 0.73
RPS4Y1P22090 AF213884.3-201ENST00000563833 479 ntBASIC19.62■□□□□ 0.73
RPS4Y1P22090 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4Y1P22090 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4Y1P22090 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4Y1P22090 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.62■□□□□ 0.73
RPS4Y1P22090 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms