Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.33■□□□□ 0.84
CCL4P13236 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CCL4P13236 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCL4P13236 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.33■□□□□ 0.84
CCL4P13236 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.33■□□□□ 0.84
CCL4P13236 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.32■□□□□ 0.84
CCL4P13236 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.32■□□□□ 0.84
CCL4P13236 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCL4P13236 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCL4P13236 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCL4P13236 AC133552.2-202ENST00000575694 574 ntBASIC20.32■□□□□ 0.84
CCL4P13236 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.32■□□□□ 0.84
CCL4P13236 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.32■□□□□ 0.84
CCL4P13236 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCL4P13236 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCL4P13236 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCL4P13236 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.32■□□□□ 0.84
CCL4P13236 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CCL4P13236 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCL4P13236 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCL4P13236 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCL4P13236 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CCL4P13236 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCL4P13236 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
CCL4P13236 TERF1P5-201ENST00000477545 1207 ntBASIC20.31■□□□□ 0.84
CCL4P13236 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.31■□□□□ 0.84
CCL4P13236 AC053503.5-201ENST00000601508 636 ntBASIC20.31■□□□□ 0.84
CCL4P13236 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.31■□□□□ 0.84
CCL4P13236 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCL4P13236 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.31■□□□□ 0.84
CCL4P13236 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCL4P13236 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCL4P13236 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.31■□□□□ 0.84
CCL4P13236 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCL4P13236 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCL4P13236 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCL4P13236 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CCL4P13236 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.3■□□□□ 0.84
CCL4P13236 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCL4P13236 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCL4P13236 AC069152.1-201ENST00000438030 544 ntBASIC20.3■□□□□ 0.84
CCL4P13236 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.3■□□□□ 0.84
CCL4P13236 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCL4P13236 AC098934.4-201ENST00000564127 592 ntBASIC20.3■□□□□ 0.84
CCL4P13236 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.3■□□□□ 0.84
CCL4P13236 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCL4P13236 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCL4P13236 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCL4P13236 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCL4P13236 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.29■□□□□ 0.84
CCL4P13236 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCL4P13236 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.29■□□□□ 0.84
CCL4P13236 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.29■□□□□ 0.84
CCL4P13236 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.29■□□□□ 0.84
CCL4P13236 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.29■□□□□ 0.84
CCL4P13236 AC013268.1-206ENST00000638368 961 ntBASIC20.29■□□□□ 0.84
CCL4P13236 AC112229.1-201ENST00000639295 961 ntBASIC20.29■□□□□ 0.84
CCL4P13236 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCL4P13236 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.29■□□□□ 0.84
CCL4P13236 AC137767.1-201ENST00000602918 1920 ntBASIC20.29■□□□□ 0.84
CCL4P13236 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCL4P13236 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCL4P13236 AC087742.1-201ENST00000575880 1738 ntBASIC20.28■□□□□ 0.84
CCL4P13236 SLC7A5P1-201ENST00000568957 537 ntBASIC20.28■□□□□ 0.84
CCL4P13236 MIR4651-201ENST00000582622 73 ntBASIC20.28■□□□□ 0.84
CCL4P13236 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.28■□□□□ 0.84
CCL4P13236 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CCL4P13236 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCL4P13236 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCL4P13236 AC068338.2-201ENST00000563278 1430 ntBASIC20.27■□□□□ 0.84
CCL4P13236 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCL4P13236 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCL4P13236 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CCL4P13236 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCL4P13236 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCL4P13236 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCL4P13236 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCL4P13236 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.27■□□□□ 0.84
CCL4P13236 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.27■□□□□ 0.84
CCL4P13236 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.27■□□□□ 0.84
CCL4P13236 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.27■□□□□ 0.84
CCL4P13236 AC133041.1-202ENST00000642053 222 ntBASIC20.27■□□□□ 0.84
CCL4P13236 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCL4P13236 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCL4P13236 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.26■□□□□ 0.83
CCL4P13236 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCL4P13236 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCL4P13236 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.26■□□□□ 0.83
CCL4P13236 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.26■□□□□ 0.83
CCL4P13236 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCL4P13236 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCL4P13236 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCL4P13236 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCL4P13236 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.26■□□□□ 0.83
CCL4P13236 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCL4P13236 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.26■□□□□ 0.83
CCL4P13236 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCL4P13236 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCL4P13236 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCL4P13236 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms