Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 AL356441.2-201ENST00000443009 864 ntBASIC17.32■□□□□ 0.36
DEFA4P12838 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.32■□□□□ 0.36
DEFA4P12838 AC092171.4-201ENST00000609130 632 ntBASIC17.32■□□□□ 0.36
DEFA4P12838 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
DEFA4P12838 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DEFA4P12838 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DEFA4P12838 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DEFA4P12838 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DEFA4P12838 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.31■□□□□ 0.36
DEFA4P12838 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.31■□□□□ 0.36
DEFA4P12838 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DEFA4P12838 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DEFA4P12838 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
DEFA4P12838 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
DEFA4P12838 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DEFA4P12838 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DEFA4P12838 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.31■□□□□ 0.36
DEFA4P12838 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.31■□□□□ 0.36
DEFA4P12838 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
DEFA4P12838 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
DEFA4P12838 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
DEFA4P12838 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
DEFA4P12838 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DEFA4P12838 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
DEFA4P12838 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DEFA4P12838 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DEFA4P12838 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DEFA4P12838 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.3■□□□□ 0.36
DEFA4P12838 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
DEFA4P12838 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DEFA4P12838 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.3■□□□□ 0.36
DEFA4P12838 AC099791.2-201ENST00000605725 427 ntBASIC17.3■□□□□ 0.36
DEFA4P12838 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DEFA4P12838 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DEFA4P12838 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DEFA4P12838 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DEFA4P12838 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DEFA4P12838 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
DEFA4P12838 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DEFA4P12838 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
DEFA4P12838 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
DEFA4P12838 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
DEFA4P12838 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DEFA4P12838 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.29■□□□□ 0.36
DEFA4P12838 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DEFA4P12838 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
DEFA4P12838 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DEFA4P12838 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
DEFA4P12838 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
DEFA4P12838 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.29■□□□□ 0.36
DEFA4P12838 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
DEFA4P12838 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
DEFA4P12838 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DEFA4P12838 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DEFA4P12838 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
DEFA4P12838 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
DEFA4P12838 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
DEFA4P12838 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.28■□□□□ 0.36
DEFA4P12838 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
DEFA4P12838 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DEFA4P12838 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.28■□□□□ 0.36
DEFA4P12838 AL499627.2-201ENST00000606283 725 ntBASIC17.28■□□□□ 0.36
DEFA4P12838 pRNA.6-201ENST00000610482 90 ntBASIC17.28■□□□□ 0.36
DEFA4P12838 pRNA.5-201ENST00000612139 90 ntBASIC17.28■□□□□ 0.36
DEFA4P12838 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.28■□□□□ 0.36
DEFA4P12838 pRNA.11-201ENST00000618423 90 ntBASIC17.28■□□□□ 0.36
DEFA4P12838 pRNA.13-201ENST00000619112 90 ntBASIC17.28■□□□□ 0.36
DEFA4P12838 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
DEFA4P12838 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
DEFA4P12838 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DEFA4P12838 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DEFA4P12838 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DEFA4P12838 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.27■□□□□ 0.36
DEFA4P12838 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DEFA4P12838 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DEFA4P12838 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
DEFA4P12838 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
DEFA4P12838 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.27■□□□□ 0.36
DEFA4P12838 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DEFA4P12838 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.27■□□□□ 0.36
DEFA4P12838 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
DEFA4P12838 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.27■□□□□ 0.35
DEFA4P12838 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.27■□□□□ 0.35
DEFA4P12838 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
DEFA4P12838 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
DEFA4P12838 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DEFA4P12838 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DEFA4P12838 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DEFA4P12838 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
DEFA4P12838 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DEFA4P12838 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DEFA4P12838 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DEFA4P12838 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.26■□□□□ 0.35
DEFA4P12838 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
DEFA4P12838 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DEFA4P12838 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.26■□□□□ 0.35
DEFA4P12838 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DEFA4P12838 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.26■□□□□ 0.35
DEFA4P12838 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DEFA4P12838 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms