Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RFPL1O75677 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RFPL1O75677 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.48■■□□□ 1.03
RFPL1O75677 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.48■■□□□ 1.03
RFPL1O75677 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFPL1O75677 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFPL1O75677 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.47■■□□□ 1.03
RFPL1O75677 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFPL1O75677 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
RFPL1O75677 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RFPL1O75677 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RFPL1O75677 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.47■■□□□ 1.03
RFPL1O75677 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RFPL1O75677 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.47■■□□□ 1.03
RFPL1O75677 MIR5787-201ENST00000611784 55 ntBASIC21.47■■□□□ 1.03
RFPL1O75677 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.47■■□□□ 1.03
RFPL1O75677 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.47■■□□□ 1.03
RFPL1O75677 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RFPL1O75677 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFPL1O75677 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RFPL1O75677 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFPL1O75677 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.46■■□□□ 1.03
RFPL1O75677 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFPL1O75677 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.46■■□□□ 1.03
RFPL1O75677 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RFPL1O75677 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.46■■□□□ 1.03
RFPL1O75677 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFPL1O75677 DUX4L19-201ENST00000557448 1267 ntBASIC21.46■■□□□ 1.03
RFPL1O75677 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
RFPL1O75677 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.46■■□□□ 1.03
RFPL1O75677 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
RFPL1O75677 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RFPL1O75677 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFPL1O75677 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFPL1O75677 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
RFPL1O75677 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RFPL1O75677 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFPL1O75677 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
RFPL1O75677 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
RFPL1O75677 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFPL1O75677 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RFPL1O75677 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RFPL1O75677 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.45■■□□□ 1.02
RFPL1O75677 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
RFPL1O75677 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RFPL1O75677 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RFPL1O75677 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.45■■□□□ 1.02
RFPL1O75677 AC105265.2-201ENST00000467189 838 ntBASIC21.45■■□□□ 1.02
RFPL1O75677 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
RFPL1O75677 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.45■■□□□ 1.02
RFPL1O75677 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.45■■□□□ 1.02
RFPL1O75677 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
RFPL1O75677 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RFPL1O75677 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFPL1O75677 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
RFPL1O75677 AC133637.1-201ENST00000624115 1537 ntBASIC21.45■■□□□ 1.02
RFPL1O75677 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RFPL1O75677 SLC25A24-204ENST00000569674 2357 ntBASIC21.44■■□□□ 1.02
RFPL1O75677 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
RFPL1O75677 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RFPL1O75677 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.44■■□□□ 1.02
RFPL1O75677 AC241377.3-202ENST00000626088 1088 ntBASIC21.44■■□□□ 1.02
RFPL1O75677 AC241585.3-202ENST00000628937 1088 ntBASIC21.44■■□□□ 1.02
RFPL1O75677 AC245100.8-202ENST00000629247 1058 ntBASIC21.44■■□□□ 1.02
RFPL1O75677 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.44■■□□□ 1.02
RFPL1O75677 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RFPL1O75677 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFPL1O75677 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RFPL1O75677 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFPL1O75677 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.44■■□□□ 1.02
RFPL1O75677 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFPL1O75677 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFPL1O75677 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
RFPL1O75677 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.43■■□□□ 1.02
RFPL1O75677 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.43■■□□□ 1.02
RFPL1O75677 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFPL1O75677 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.43■■□□□ 1.02
RFPL1O75677 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.43■■□□□ 1.02
RFPL1O75677 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.43■■□□□ 1.02
RFPL1O75677 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFPL1O75677 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.43■■□□□ 1.02
RFPL1O75677 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RFPL1O75677 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFPL1O75677 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.43■■□□□ 1.02
RFPL1O75677 AC006455.2-201ENST00000429931 906 ntBASIC21.43■■□□□ 1.02
RFPL1O75677 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.43■■□□□ 1.02
RFPL1O75677 AF213884.3-201ENST00000563833 479 ntBASIC21.43■■□□□ 1.02
RFPL1O75677 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
RFPL1O75677 AC104564.3-201ENST00000582367 638 ntBASIC21.43■■□□□ 1.02
RFPL1O75677 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFPL1O75677 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RFPL1O75677 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFPL1O75677 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFPL1O75677 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.43■■□□□ 1.02
RFPL1O75677 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFPL1O75677 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.43■■□□□ 1.02
RFPL1O75677 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RFPL1O75677 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFPL1O75677 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RFPL1O75677 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms