Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 MIR663A-201ENST00000385250 93 ntBASIC29.77■■■□□ 2.36
BRD4O60885 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC29.77■■■□□ 2.36
BRD4O60885 AL109923.1-201ENST00000618799 583 ntBASIC29.77■■■□□ 2.36
BRD4O60885 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC29.76■■■□□ 2.36
BRD4O60885 AC079834.2-201ENST00000609776 1949 ntBASIC29.76■■■□□ 2.36
BRD4O60885 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC29.76■■■□□ 2.35
BRD4O60885 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
BRD4O60885 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
BRD4O60885 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
BRD4O60885 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC29.75■■■□□ 2.35
BRD4O60885 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
BRD4O60885 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
BRD4O60885 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
BRD4O60885 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC29.75■■■□□ 2.35
BRD4O60885 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC29.75■■■□□ 2.35
BRD4O60885 TFG-210ENST00000620299 1289 ntTSL 5 BASIC29.75■■■□□ 2.35
BRD4O60885 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
BRD4O60885 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
BRD4O60885 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC29.74■■■□□ 2.35
BRD4O60885 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
BRD4O60885 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC29.74■■■□□ 2.35
BRD4O60885 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
BRD4O60885 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
BRD4O60885 LINC01960-201ENST00000563759 1884 ntBASIC29.74■■■□□ 2.35
BRD4O60885 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
BRD4O60885 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC29.74■■■□□ 2.35
BRD4O60885 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC29.74■■■□□ 2.35
BRD4O60885 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
BRD4O60885 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
BRD4O60885 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC29.73■■■□□ 2.35
BRD4O60885 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC29.73■■■□□ 2.35
BRD4O60885 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC29.73■■■□□ 2.35
BRD4O60885 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC29.73■■■□□ 2.35
BRD4O60885 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
BRD4O60885 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
BRD4O60885 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC29.72■■■□□ 2.35
BRD4O60885 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
BRD4O60885 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC29.72■■■□□ 2.35
BRD4O60885 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
BRD4O60885 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
BRD4O60885 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC29.72■■■□□ 2.35
BRD4O60885 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC29.72■■■□□ 2.35
BRD4O60885 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC29.72■■■□□ 2.35
BRD4O60885 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
BRD4O60885 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
BRD4O60885 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
BRD4O60885 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
BRD4O60885 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC29.71■■■□□ 2.35
BRD4O60885 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC29.71■■■□□ 2.35
BRD4O60885 AC142086.2-201ENST00000569753 217 ntBASIC29.71■■■□□ 2.35
BRD4O60885 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC29.71■■■□□ 2.35
BRD4O60885 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
BRD4O60885 AC242852.2-201ENST00000615738 1807 ntBASIC29.71■■■□□ 2.35
BRD4O60885 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC29.71■■■□□ 2.35
BRD4O60885 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
BRD4O60885 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC29.7■■■□□ 2.35
BRD4O60885 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.35
BRD4O60885 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC29.7■■■□□ 2.35
BRD4O60885 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.35
BRD4O60885 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
BRD4O60885 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.35
BRD4O60885 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC29.7■■■□□ 2.35
BRD4O60885 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.34
BRD4O60885 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
BRD4O60885 LSR-203ENST00000360798 1963 ntTSL 2 BASIC29.69■■■□□ 2.34
BRD4O60885 AC139530.1-201ENST00000575312 1977 ntBASIC29.69■■■□□ 2.34
BRD4O60885 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
BRD4O60885 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
BRD4O60885 GPX1P1-201ENST00000388829 606 ntBASIC29.69■■■□□ 2.34
BRD4O60885 AC104187.1-201ENST00000607510 612 ntBASIC29.69■■■□□ 2.34
BRD4O60885 AC231657.2-201ENST00000624556 255 ntBASIC29.69■■■□□ 2.34
BRD4O60885 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
BRD4O60885 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
BRD4O60885 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC29.69■■■□□ 2.34
BRD4O60885 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
BRD4O60885 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
BRD4O60885 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
BRD4O60885 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC29.68■■■□□ 2.34
BRD4O60885 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
BRD4O60885 AL355802.2-201ENST00000402069 882 ntBASIC29.68■■■□□ 2.34
BRD4O60885 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
BRD4O60885 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
BRD4O60885 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
BRD4O60885 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC29.67■■■□□ 2.34
BRD4O60885 LINC00526-201ENST00000581067 1875 ntBASIC29.67■■■□□ 2.34
BRD4O60885 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
BRD4O60885 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC29.67■■■□□ 2.34
BRD4O60885 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC29.67■■■□□ 2.34
BRD4O60885 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC29.67■■■□□ 2.34
BRD4O60885 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
BRD4O60885 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
BRD4O60885 ABHD17AP1-201ENST00000358206 933 ntBASIC29.66■■■□□ 2.34
BRD4O60885 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
BRD4O60885 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC29.66■■■□□ 2.34
BRD4O60885 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC29.66■■■□□ 2.34
BRD4O60885 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC29.66■■■□□ 2.34
BRD4O60885 AL050303.2-201ENST00000619798 666 ntBASIC29.66■■■□□ 2.34
BRD4O60885 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
BRD4O60885 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
BRD4O60885 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC29.66■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms