Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.29■□□□□ 0.36
CUBNO60494 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.29■□□□□ 0.36
CUBNO60494 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CUBNO60494 LINC01023-201ENST00000606054 436 ntBASIC17.29■□□□□ 0.36
CUBNO60494 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CUBNO60494 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CUBNO60494 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.28■□□□□ 0.36
CUBNO60494 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CUBNO60494 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CUBNO60494 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CUBNO60494 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.28■□□□□ 0.36
CUBNO60494 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.28■□□□□ 0.36
CUBNO60494 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.28■□□□□ 0.36
CUBNO60494 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CUBNO60494 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CUBNO60494 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.28■□□□□ 0.36
CUBNO60494 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.28■□□□□ 0.36
CUBNO60494 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.28■□□□□ 0.36
CUBNO60494 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CUBNO60494 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CUBNO60494 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CUBNO60494 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.27■□□□□ 0.36
CUBNO60494 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.27■□□□□ 0.36
CUBNO60494 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
CUBNO60494 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CUBNO60494 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CUBNO60494 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.27■□□□□ 0.36
CUBNO60494 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CUBNO60494 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.27■□□□□ 0.36
CUBNO60494 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.27■□□□□ 0.36
CUBNO60494 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CUBNO60494 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CUBNO60494 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CUBNO60494 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CUBNO60494 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CUBNO60494 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CUBNO60494 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CUBNO60494 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CUBNO60494 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.26■□□□□ 0.35
CUBNO60494 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.26■□□□□ 0.35
CUBNO60494 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CUBNO60494 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CUBNO60494 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CUBNO60494 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.26■□□□□ 0.35
CUBNO60494 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CUBNO60494 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CUBNO60494 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CUBNO60494 TERF1P5-201ENST00000477545 1207 ntBASIC17.26■□□□□ 0.35
CUBNO60494 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.26■□□□□ 0.35
CUBNO60494 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.26■□□□□ 0.35
CUBNO60494 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CUBNO60494 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CUBNO60494 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.26■□□□□ 0.35
CUBNO60494 RCN1P1-201ENST00000400413 996 ntBASIC17.26■□□□□ 0.35
CUBNO60494 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CUBNO60494 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.26■□□□□ 0.35
CUBNO60494 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.26■□□□□ 0.35
CUBNO60494 AC008403.3-201ENST00000598924 454 ntBASIC17.26■□□□□ 0.35
CUBNO60494 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CUBNO60494 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CUBNO60494 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CUBNO60494 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CUBNO60494 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CUBNO60494 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CUBNO60494 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.25■□□□□ 0.35
CUBNO60494 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CUBNO60494 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CUBNO60494 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.25■□□□□ 0.35
CUBNO60494 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CUBNO60494 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CUBNO60494 BX276092.2-201ENST00000417668 665 ntBASIC17.25■□□□□ 0.35
CUBNO60494 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.25■□□□□ 0.35
CUBNO60494 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CUBNO60494 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CUBNO60494 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.24■□□□□ 0.35
CUBNO60494 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CUBNO60494 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CUBNO60494 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CUBNO60494 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CUBNO60494 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.23■□□□□ 0.35
CUBNO60494 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CUBNO60494 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.23■□□□□ 0.35
CUBNO60494 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.23■□□□□ 0.35
CUBNO60494 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CUBNO60494 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CUBNO60494 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CUBNO60494 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
CUBNO60494 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CUBNO60494 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CUBNO60494 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CUBNO60494 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CUBNO60494 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.23■□□□□ 0.35
CUBNO60494 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.23■□□□□ 0.35
CUBNO60494 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CUBNO60494 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CUBNO60494 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.23■□□□□ 0.35
CUBNO60494 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CUBNO60494 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CUBNO60494 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.23■□□□□ 0.35
CUBNO60494 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms