Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA12O60330 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHGA12O60330 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA12O60330 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA12O60330 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA12O60330 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA12O60330 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDHGA12O60330 TSPY6P-201ENST00000448518 926 ntBASIC21.21■□□□□ 0.99
PCDHGA12O60330 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDHGA12O60330 AC083906.2-201ENST00000511578 360 ntBASIC21.21■□□□□ 0.99
PCDHGA12O60330 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.21■□□□□ 0.99
PCDHGA12O60330 AL050303.2-201ENST00000619798 666 ntBASIC21.21■□□□□ 0.99
PCDHGA12O60330 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA12O60330 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PCDHGA12O60330 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGA12O60330 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDHGA12O60330 DUX4L16-201ENST00000555130 1264 ntBASIC21.2■□□□□ 0.98
PCDHGA12O60330 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.2■□□□□ 0.98
PCDHGA12O60330 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDHGA12O60330 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGA12O60330 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PCDHGA12O60330 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDHGA12O60330 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGA12O60330 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.2■□□□□ 0.98
PCDHGA12O60330 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
PCDHGA12O60330 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGA12O60330 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.19■□□□□ 0.98
PCDHGA12O60330 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PCDHGA12O60330 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PCDHGA12O60330 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
PCDHGA12O60330 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGA12O60330 AC007322.1-201ENST00000426983 750 ntBASIC21.19■□□□□ 0.98
PCDHGA12O60330 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGA12O60330 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.19■□□□□ 0.98
PCDHGA12O60330 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDHGA12O60330 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDHGA12O60330 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGA12O60330 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDHGA12O60330 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGA12O60330 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGA12O60330 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGA12O60330 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA12O60330 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA12O60330 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.18■□□□□ 0.98
PCDHGA12O60330 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHGA12O60330 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA12O60330 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PCDHGA12O60330 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHGA12O60330 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA12O60330 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.18■□□□□ 0.98
PCDHGA12O60330 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA12O60330 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDHGA12O60330 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDHGA12O60330 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA12O60330 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA12O60330 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PCDHGA12O60330 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA12O60330 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PCDHGA12O60330 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHGA12O60330 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGA12O60330 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PCDHGA12O60330 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGA12O60330 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGA12O60330 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGA12O60330 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGA12O60330 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PCDHGA12O60330 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGA12O60330 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGA12O60330 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHGA12O60330 SLC7A5P2-201ENST00000553010 536 ntBASIC21.17■□□□□ 0.98
PCDHGA12O60330 AC005181.1-201ENST00000604782 1256 ntBASIC21.17■□□□□ 0.98
PCDHGA12O60330 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGA12O60330 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHGA12O60330 DUSP8P3-201ENST00000399571 1760 ntBASIC21.16■□□□□ 0.98
PCDHGA12O60330 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGA12O60330 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.16■□□□□ 0.98
PCDHGA12O60330 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGA12O60330 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PCDHGA12O60330 GUSBP6-202ENST00000438529 1198 ntBASIC21.16■□□□□ 0.98
PCDHGA12O60330 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.16■□□□□ 0.98
PCDHGA12O60330 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHGA12O60330 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.16■□□□□ 0.98
PCDHGA12O60330 UBE2DNL-204ENST00000602536 740 ntBASIC21.16■□□□□ 0.98
PCDHGA12O60330 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDHGA12O60330 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGA12O60330 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PCDHGA12O60330 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHGA12O60330 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
PCDHGA12O60330 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PCDHGA12O60330 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGA12O60330 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGA12O60330 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
PCDHGA12O60330 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.15■□□□□ 0.98
PCDHGA12O60330 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHGA12O60330 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA12O60330 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA12O60330 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA12O60330 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA12O60330 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA12O60330 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms