Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SSX5O60225 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.28■□□□□ 0.52
SSX5O60225 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
SSX5O60225 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.28■□□□□ 0.52
SSX5O60225 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSX5O60225 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.52
SSX5O60225 AC009102.2-201ENST00000606772 1639 ntBASIC18.27■□□□□ 0.52
SSX5O60225 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSX5O60225 KRT8P33-201ENST00000508125 1423 ntBASIC18.27■□□□□ 0.52
SSX5O60225 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSX5O60225 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSX5O60225 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
SSX5O60225 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.27■□□□□ 0.52
SSX5O60225 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSX5O60225 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSX5O60225 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSX5O60225 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SSX5O60225 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SSX5O60225 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
SSX5O60225 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SSX5O60225 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.26■□□□□ 0.51
SSX5O60225 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSX5O60225 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSX5O60225 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSX5O60225 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.26■□□□□ 0.51
SSX5O60225 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.26■□□□□ 0.51
SSX5O60225 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSX5O60225 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.26■□□□□ 0.51
SSX5O60225 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSX5O60225 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.26■□□□□ 0.51
SSX5O60225 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSX5O60225 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.26■□□□□ 0.51
SSX5O60225 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.26■□□□□ 0.51
SSX5O60225 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.26■□□□□ 0.51
SSX5O60225 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSX5O60225 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSX5O60225 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SSX5O60225 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SSX5O60225 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SSX5O60225 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.25■□□□□ 0.51
SSX5O60225 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SSX5O60225 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SSX5O60225 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SSX5O60225 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SSX5O60225 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SSX5O60225 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SSX5O60225 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SSX5O60225 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SSX5O60225 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SSX5O60225 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
SSX5O60225 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SSX5O60225 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SSX5O60225 AC021242.3-201ENST00000607598 1377 ntBASIC18.25■□□□□ 0.51
SSX5O60225 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SSX5O60225 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.25■□□□□ 0.51
SSX5O60225 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SSX5O60225 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.24■□□□□ 0.51
SSX5O60225 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
SSX5O60225 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SSX5O60225 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SSX5O60225 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SSX5O60225 AL157384.1-201ENST00000445995 2473 ntBASIC18.24■□□□□ 0.51
SSX5O60225 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SSX5O60225 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.24■□□□□ 0.51
SSX5O60225 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.24■□□□□ 0.51
SSX5O60225 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.24■□□□□ 0.51
SSX5O60225 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SSX5O60225 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SSX5O60225 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.24■□□□□ 0.51
SSX5O60225 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SSX5O60225 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SSX5O60225 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.24■□□□□ 0.51
SSX5O60225 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.24■□□□□ 0.51
SSX5O60225 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
SSX5O60225 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.23■□□□□ 0.51
SSX5O60225 AC026471.6-201ENST00000622954 1905 ntBASIC18.23■□□□□ 0.51
SSX5O60225 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SSX5O60225 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.23■□□□□ 0.51
SSX5O60225 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SSX5O60225 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SSX5O60225 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.23■□□□□ 0.51
SSX5O60225 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SSX5O60225 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SSX5O60225 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SSX5O60225 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SSX5O60225 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.23■□□□□ 0.51
SSX5O60225 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.23■□□□□ 0.51
SSX5O60225 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SSX5O60225 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SSX5O60225 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.23■□□□□ 0.51
SSX5O60225 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SSX5O60225 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.23■□□□□ 0.51
SSX5O60225 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSX5O60225 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SSX5O60225 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSX5O60225 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.22■□□□□ 0.51
SSX5O60225 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSX5O60225 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSX5O60225 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SSX5O60225 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms