Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC092053.2-201ENST00000640557 1818 ntBASIC21.72■■□□□ 1.07
SMAD6O43541 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMAD6O43541 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.72■■□□□ 1.07
SMAD6O43541 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.72■■□□□ 1.07
SMAD6O43541 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.72■■□□□ 1.07
SMAD6O43541 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMAD6O43541 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMAD6O43541 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
SMAD6O43541 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SMAD6O43541 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SMAD6O43541 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMAD6O43541 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SMAD6O43541 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.72■■□□□ 1.07
SMAD6O43541 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMAD6O43541 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.71■■□□□ 1.07
SMAD6O43541 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.71■■□□□ 1.07
SMAD6O43541 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMAD6O43541 GUSBP5-202ENST00000510805 1989 ntBASIC21.71■■□□□ 1.07
SMAD6O43541 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMAD6O43541 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.71■■□□□ 1.07
SMAD6O43541 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.71■■□□□ 1.07
SMAD6O43541 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMAD6O43541 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.71■■□□□ 1.07
SMAD6O43541 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.71■■□□□ 1.07
SMAD6O43541 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMAD6O43541 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMAD6O43541 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMAD6O43541 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.71■■□□□ 1.07
SMAD6O43541 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMAD6O43541 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMAD6O43541 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMAD6O43541 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMAD6O43541 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMAD6O43541 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.7■■□□□ 1.06
SMAD6O43541 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.7■■□□□ 1.06
SMAD6O43541 AC104187.1-201ENST00000607510 612 ntBASIC21.7■■□□□ 1.06
SMAD6O43541 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.7■■□□□ 1.06
SMAD6O43541 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMAD6O43541 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.7■■□□□ 1.06
SMAD6O43541 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMAD6O43541 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMAD6O43541 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMAD6O43541 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMAD6O43541 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMAD6O43541 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMAD6O43541 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.69■■□□□ 1.06
SMAD6O43541 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.69■■□□□ 1.06
SMAD6O43541 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMAD6O43541 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.69■■□□□ 1.06
SMAD6O43541 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
SMAD6O43541 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.69■■□□□ 1.06
SMAD6O43541 AL137784.2-201ENST00000607332 1000 ntBASIC21.69■■□□□ 1.06
SMAD6O43541 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMAD6O43541 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMAD6O43541 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.69■■□□□ 1.06
SMAD6O43541 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SMAD6O43541 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMAD6O43541 AC026471.6-201ENST00000622954 1905 ntBASIC21.68■■□□□ 1.06
SMAD6O43541 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMAD6O43541 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMAD6O43541 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMAD6O43541 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMAD6O43541 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.68■■□□□ 1.06
SMAD6O43541 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.68■■□□□ 1.06
SMAD6O43541 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.68■■□□□ 1.06
SMAD6O43541 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.68■■□□□ 1.06
SMAD6O43541 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.68■■□□□ 1.06
SMAD6O43541 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SMAD6O43541 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMAD6O43541 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SMAD6O43541 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMAD6O43541 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMAD6O43541 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMAD6O43541 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.67■■□□□ 1.06
SMAD6O43541 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMAD6O43541 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.67■■□□□ 1.06
SMAD6O43541 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.67■■□□□ 1.06
SMAD6O43541 KRT19P1-201ENST00000405746 1186 ntBASIC21.67■■□□□ 1.06
SMAD6O43541 AC004911.1-201ENST00000416316 871 ntBASIC21.67■■□□□ 1.06
SMAD6O43541 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.67■■□□□ 1.06
SMAD6O43541 AC137761.2-201ENST00000561729 223 ntBASIC21.67■■□□□ 1.06
SMAD6O43541 AC145350.3-201ENST00000569033 163 ntBASIC21.67■■□□□ 1.06
SMAD6O43541 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMAD6O43541 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMAD6O43541 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMAD6O43541 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SMAD6O43541 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SMAD6O43541 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMAD6O43541 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMAD6O43541 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.66■■□□□ 1.06
SMAD6O43541 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.66■■□□□ 1.06
SMAD6O43541 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMAD6O43541 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.66■■□□□ 1.06
SMAD6O43541 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SMAD6O43541 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMAD6O43541 AC242852.2-201ENST00000615738 1807 ntBASIC21.66■■□□□ 1.06
SMAD6O43541 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SMAD6O43541 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMAD6O43541 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMAD6O43541 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms