Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRDV1A0A1B0GX56 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TRDV1A0A1B0GX56 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRDV1A0A1B0GX56 AC007952.6-201ENST00000573168 2673 ntBASIC18.84■□□□□ 0.61
TRDV1A0A1B0GX56 AC003957.1-201ENST00000625108 2673 ntBASIC18.84■□□□□ 0.61
TRDV1A0A1B0GX56 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
TRDV1A0A1B0GX56 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRDV1A0A1B0GX56 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRDV1A0A1B0GX56 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.83■□□□□ 0.61
TRDV1A0A1B0GX56 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRDV1A0A1B0GX56 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRDV1A0A1B0GX56 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRDV1A0A1B0GX56 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRDV1A0A1B0GX56 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRDV1A0A1B0GX56 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
TRDV1A0A1B0GX56 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRDV1A0A1B0GX56 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.83■□□□□ 0.6
TRDV1A0A1B0GX56 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRDV1A0A1B0GX56 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRDV1A0A1B0GX56 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRDV1A0A1B0GX56 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.83■□□□□ 0.6
TRDV1A0A1B0GX56 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRDV1A0A1B0GX56 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.82■□□□□ 0.6
TRDV1A0A1B0GX56 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.82■□□□□ 0.6
TRDV1A0A1B0GX56 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.82■□□□□ 0.6
TRDV1A0A1B0GX56 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.82■□□□□ 0.6
TRDV1A0A1B0GX56 AC079089.2-201ENST00000531211 1277 ntBASIC18.82■□□□□ 0.6
TRDV1A0A1B0GX56 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.82■□□□□ 0.6
TRDV1A0A1B0GX56 BHLHE23-202ENST00000612929 1109 ntBASIC18.82■□□□□ 0.6
TRDV1A0A1B0GX56 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRDV1A0A1B0GX56 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRDV1A0A1B0GX56 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
TRDV1A0A1B0GX56 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRDV1A0A1B0GX56 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRDV1A0A1B0GX56 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRDV1A0A1B0GX56 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRDV1A0A1B0GX56 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TRDV1A0A1B0GX56 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRDV1A0A1B0GX56 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRDV1A0A1B0GX56 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.82■□□□□ 0.6
TRDV1A0A1B0GX56 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.82■□□□□ 0.6
TRDV1A0A1B0GX56 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRDV1A0A1B0GX56 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRDV1A0A1B0GX56 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRDV1A0A1B0GX56 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.81■□□□□ 0.6
TRDV1A0A1B0GX56 RARRES2P2-201ENST00000394842 485 ntBASIC18.81■□□□□ 0.6
TRDV1A0A1B0GX56 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.81■□□□□ 0.6
TRDV1A0A1B0GX56 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.81■□□□□ 0.6
TRDV1A0A1B0GX56 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.81■□□□□ 0.6
TRDV1A0A1B0GX56 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
TRDV1A0A1B0GX56 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRDV1A0A1B0GX56 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRDV1A0A1B0GX56 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRDV1A0A1B0GX56 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
TRDV1A0A1B0GX56 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
TRDV1A0A1B0GX56 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRDV1A0A1B0GX56 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TRDV1A0A1B0GX56 GABARAPL3-202ENST00000624044 1851 ntBASIC18.8■□□□□ 0.6
TRDV1A0A1B0GX56 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRDV1A0A1B0GX56 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.8■□□□□ 0.6
TRDV1A0A1B0GX56 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRDV1A0A1B0GX56 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
TRDV1A0A1B0GX56 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.8■□□□□ 0.6
TRDV1A0A1B0GX56 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TRDV1A0A1B0GX56 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRDV1A0A1B0GX56 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.8■□□□□ 0.6
TRDV1A0A1B0GX56 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRDV1A0A1B0GX56 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRDV1A0A1B0GX56 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.8■□□□□ 0.6
TRDV1A0A1B0GX56 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
TRDV1A0A1B0GX56 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRDV1A0A1B0GX56 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.79■□□□□ 0.6
TRDV1A0A1B0GX56 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRDV1A0A1B0GX56 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
TRDV1A0A1B0GX56 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.79■□□□□ 0.6
TRDV1A0A1B0GX56 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRDV1A0A1B0GX56 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.79■□□□□ 0.6
TRDV1A0A1B0GX56 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRDV1A0A1B0GX56 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRDV1A0A1B0GX56 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRDV1A0A1B0GX56 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRDV1A0A1B0GX56 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRDV1A0A1B0GX56 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRDV1A0A1B0GX56 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRDV1A0A1B0GX56 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRDV1A0A1B0GX56 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRDV1A0A1B0GX56 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRDV1A0A1B0GX56 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRDV1A0A1B0GX56 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRDV1A0A1B0GX56 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRDV1A0A1B0GX56 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRDV1A0A1B0GX56 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRDV1A0A1B0GX56 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRDV1A0A1B0GX56 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TRDV1A0A1B0GX56 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRDV1A0A1B0GX56 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRDV1A0A1B0GX56 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRDV1A0A1B0GX56 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.78■□□□□ 0.6
TRDV1A0A1B0GX56 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TRDV1A0A1B0GX56 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms