Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AC005224.4-201ENST00000583262 1652 ntBASIC16.85■□□□□ 0.29
TRAV41A0A0B4J266 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRAV41A0A0B4J266 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV41A0A0B4J266 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV41A0A0B4J266 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV41A0A0B4J266 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV41A0A0B4J266 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV41A0A0B4J266 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV41A0A0B4J266 TPRG1LP1-201ENST00000598702 760 ntBASIC16.85■□□□□ 0.29
TRAV41A0A0B4J266 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV41A0A0B4J266 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV41A0A0B4J266 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAV41A0A0B4J266 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV41A0A0B4J266 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV41A0A0B4J266 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV41A0A0B4J266 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV41A0A0B4J266 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV41A0A0B4J266 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TRAV41A0A0B4J266 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV41A0A0B4J266 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV41A0A0B4J266 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV41A0A0B4J266 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV41A0A0B4J266 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV41A0A0B4J266 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV41A0A0B4J266 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV41A0A0B4J266 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV41A0A0B4J266 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV41A0A0B4J266 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV41A0A0B4J266 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV41A0A0B4J266 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAV41A0A0B4J266 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.84■□□□□ 0.29
TRAV41A0A0B4J266 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV41A0A0B4J266 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV41A0A0B4J266 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV41A0A0B4J266 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV41A0A0B4J266 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV41A0A0B4J266 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV41A0A0B4J266 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV41A0A0B4J266 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV41A0A0B4J266 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV41A0A0B4J266 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRAV41A0A0B4J266 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
TRAV41A0A0B4J266 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV41A0A0B4J266 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV41A0A0B4J266 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV41A0A0B4J266 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.83■□□□□ 0.28
TRAV41A0A0B4J266 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TRAV41A0A0B4J266 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV41A0A0B4J266 MIR935-201ENST00000401179 91 ntBASIC16.83■□□□□ 0.28
TRAV41A0A0B4J266 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV41A0A0B4J266 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV41A0A0B4J266 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV41A0A0B4J266 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC16.83■□□□□ 0.28
TRAV41A0A0B4J266 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.83■□□□□ 0.28
TRAV41A0A0B4J266 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV41A0A0B4J266 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV41A0A0B4J266 AP006587.3-201ENST00000525742 1516 ntBASIC16.82■□□□□ 0.28
TRAV41A0A0B4J266 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAV41A0A0B4J266 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAV41A0A0B4J266 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRAV41A0A0B4J266 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV41A0A0B4J266 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV41A0A0B4J266 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV41A0A0B4J266 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV41A0A0B4J266 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRAV41A0A0B4J266 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TRAV41A0A0B4J266 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV41A0A0B4J266 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.82■□□□□ 0.28
TRAV41A0A0B4J266 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV41A0A0B4J266 AC097381.1-201ENST00000429019 1296 ntBASIC16.82■□□□□ 0.28
TRAV41A0A0B4J266 RARRES2P6-201ENST00000567333 442 ntBASIC16.82■□□□□ 0.28
TRAV41A0A0B4J266 MIR6821-201ENST00000617625 74 ntBASIC16.82■□□□□ 0.28
TRAV41A0A0B4J266 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.82■□□□□ 0.28
TRAV41A0A0B4J266 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV41A0A0B4J266 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV41A0A0B4J266 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV41A0A0B4J266 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV41A0A0B4J266 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV41A0A0B4J266 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.81■□□□□ 0.28
TRAV41A0A0B4J266 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV41A0A0B4J266 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
TRAV41A0A0B4J266 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV41A0A0B4J266 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV41A0A0B4J266 FAM99A-202ENST00000538190 1989 ntBASIC16.81■□□□□ 0.28
TRAV41A0A0B4J266 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
TRAV41A0A0B4J266 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV41A0A0B4J266 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV41A0A0B4J266 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRAV41A0A0B4J266 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV41A0A0B4J266 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV41A0A0B4J266 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRAV41A0A0B4J266 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV41A0A0B4J266 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV41A0A0B4J266 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV41A0A0B4J266 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV41A0A0B4J266 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV41A0A0B4J266 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAV41A0A0B4J266 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV41A0A0B4J266 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV41A0A0B4J266 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms