Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh17Q9R100 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cdh17Q9R100 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh17Q9R100 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh17Q9R100 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh17Q9R100 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cdh17Q9R100 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh17Q9R100 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh17Q9R100 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Cdh17Q9R100 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh17Q9R100 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh17Q9R100 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.49■□□□□ 0.55
Cdh17Q9R100 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.49■□□□□ 0.55
Cdh17Q9R100 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.49■□□□□ 0.55
Cdh17Q9R100 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh17Q9R100 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh17Q9R100 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh17Q9R100 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cdh17Q9R100 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh17Q9R100 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh17Q9R100 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh17Q9R100 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh17Q9R100 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh17Q9R100 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.48■□□□□ 0.55
Cdh17Q9R100 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh17Q9R100 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh17Q9R100 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Cdh17Q9R100 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh17Q9R100 Gm11421-201ENSMUST00000122124 294 ntBASIC18.48■□□□□ 0.55
Cdh17Q9R100 Mir7075-201ENSMUST00000184187 82 ntBASIC18.48■□□□□ 0.55
Cdh17Q9R100 Gm43173-201ENSMUST00000202246 593 ntBASIC18.48■□□□□ 0.55
Cdh17Q9R100 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh17Q9R100 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh17Q9R100 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh17Q9R100 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh17Q9R100 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh17Q9R100 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh17Q9R100 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh17Q9R100 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh17Q9R100 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh17Q9R100 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh17Q9R100 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Cdh17Q9R100 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh17Q9R100 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh17Q9R100 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh17Q9R100 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh17Q9R100 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.47■□□□□ 0.55
Cdh17Q9R100 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh17Q9R100 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh17Q9R100 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.47■□□□□ 0.55
Cdh17Q9R100 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh17Q9R100 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh17Q9R100 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdh17Q9R100 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Cdh17Q9R100 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh17Q9R100 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Cdh17Q9R100 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh17Q9R100 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.46■□□□□ 0.55
Cdh17Q9R100 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.46■□□□□ 0.55
Cdh17Q9R100 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh17Q9R100 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh17Q9R100 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdh17Q9R100 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.46■□□□□ 0.55
Cdh17Q9R100 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.46■□□□□ 0.55
Cdh17Q9R100 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cdh17Q9R100 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh17Q9R100 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh17Q9R100 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh17Q9R100 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cdh17Q9R100 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh17Q9R100 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh17Q9R100 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cdh17Q9R100 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh17Q9R100 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.45■□□□□ 0.54
Cdh17Q9R100 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh17Q9R100 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh17Q9R100 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh17Q9R100 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Cdh17Q9R100 Gm7860-201ENSMUST00000121190 879 ntBASIC18.45■□□□□ 0.54
Cdh17Q9R100 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh17Q9R100 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdh17Q9R100 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Cdh17Q9R100 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh17Q9R100 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh17Q9R100 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh17Q9R100 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Cdh17Q9R100 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.44■□□□□ 0.54
Cdh17Q9R100 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh17Q9R100 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdh17Q9R100 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh17Q9R100 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh17Q9R100 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh17Q9R100 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh17Q9R100 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Cdh17Q9R100 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Cdh17Q9R100 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh17Q9R100 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Cdh17Q9R100 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cdh17Q9R100 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Cdh17Q9R100 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms