Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
RNF216Q9NWF9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.22■■□□□ 1.47
RNF216Q9NWF9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RNF216Q9NWF9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.22■■□□□ 1.47
RNF216Q9NWF9 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC24.22■■□□□ 1.47
RNF216Q9NWF9 AC114550.1-202ENST00000522661 643 ntTSL 2 BASIC24.22■■□□□ 1.47
RNF216Q9NWF9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RNF216Q9NWF9 AC121493.1-201ENST00000602316 450 ntBASIC24.22■■□□□ 1.47
RNF216Q9NWF9 AL137784.2-201ENST00000607332 1000 ntBASIC24.22■■□□□ 1.47
RNF216Q9NWF9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF216Q9NWF9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF216Q9NWF9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF216Q9NWF9 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
RNF216Q9NWF9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC24.21■■□□□ 1.47
RNF216Q9NWF9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.21■■□□□ 1.47
RNF216Q9NWF9 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF216Q9NWF9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RNF216Q9NWF9 MTND2P9-201ENST00000422293 931 ntBASIC24.21■■□□□ 1.47
RNF216Q9NWF9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC24.21■■□□□ 1.47
RNF216Q9NWF9 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC24.21■■□□□ 1.47
RNF216Q9NWF9 AL353729.2-201ENST00000605859 1249 ntBASIC24.21■■□□□ 1.47
RNF216Q9NWF9 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC24.21■■□□□ 1.47
RNF216Q9NWF9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF216Q9NWF9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF216Q9NWF9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF216Q9NWF9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF216Q9NWF9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF216Q9NWF9 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
RNF216Q9NWF9 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
RNF216Q9NWF9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
RNF216Q9NWF9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.21■■□□□ 1.47
RNF216Q9NWF9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RNF216Q9NWF9 AC144652.1-201ENST00000609974 1624 ntBASIC24.21■■□□□ 1.47
RNF216Q9NWF9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
RNF216Q9NWF9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
RNF216Q9NWF9 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC24.2■■□□□ 1.46
RNF216Q9NWF9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
RNF216Q9NWF9 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
RNF216Q9NWF9 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC24.2■■□□□ 1.46
RNF216Q9NWF9 KRT18P5-201ENST00000436075 1291 ntBASIC24.2■■□□□ 1.46
RNF216Q9NWF9 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RNF216Q9NWF9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.2■■□□□ 1.46
RNF216Q9NWF9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.2■■□□□ 1.46
RNF216Q9NWF9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RNF216Q9NWF9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RNF216Q9NWF9 C1orf229-201ENST00000623686 2258 ntBASIC24.2■■□□□ 1.46
RNF216Q9NWF9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
RNF216Q9NWF9 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RNF216Q9NWF9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RNF216Q9NWF9 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC24.19■■□□□ 1.46
RNF216Q9NWF9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RNF216Q9NWF9 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC24.19■■□□□ 1.46
RNF216Q9NWF9 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC24.19■■□□□ 1.46
RNF216Q9NWF9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.19■■□□□ 1.46
RNF216Q9NWF9 AC022517.1-201ENST00000592429 346 ntBASIC24.19■■□□□ 1.46
RNF216Q9NWF9 AC144521.1-201ENST00000607148 956 ntBASIC24.19■■□□□ 1.46
RNF216Q9NWF9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.19■■□□□ 1.46
RNF216Q9NWF9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RNF216Q9NWF9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
RNF216Q9NWF9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF216Q9NWF9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF216Q9NWF9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RNF216Q9NWF9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF216Q9NWF9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RNF216Q9NWF9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.18■■□□□ 1.46
RNF216Q9NWF9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC24.18■■□□□ 1.46
RNF216Q9NWF9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.18■■□□□ 1.46
RNF216Q9NWF9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF216Q9NWF9 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF216Q9NWF9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
RNF216Q9NWF9 CCDC152-202ENST00000388827 1237 ntTSL 2 BASIC24.18■■□□□ 1.46
RNF216Q9NWF9 RSL24D1P2-201ENST00000445584 366 ntBASIC24.18■■□□□ 1.46
RNF216Q9NWF9 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC24.18■■□□□ 1.46
RNF216Q9NWF9 CSNK1A1-209ENST00000606299 1075 ntTSL 3 BASIC24.18■■□□□ 1.46
RNF216Q9NWF9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RNF216Q9NWF9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.18■■□□□ 1.46
RNF216Q9NWF9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC24.18■■□□□ 1.46
RNF216Q9NWF9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF216Q9NWF9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RNF216Q9NWF9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF216Q9NWF9 LINC02228-203ENST00000641970 1355 ntBASIC24.17■■□□□ 1.46
RNF216Q9NWF9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
RNF216Q9NWF9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RNF216Q9NWF9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC24.17■■□□□ 1.46
RNF216Q9NWF9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF216Q9NWF9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF216Q9NWF9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF216Q9NWF9 LINC00571-201ENST00000434565 521 ntTSL 3 BASIC24.17■■□□□ 1.46
RNF216Q9NWF9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC24.17■■□□□ 1.46
RNF216Q9NWF9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RNF216Q9NWF9 AC021321.1-201ENST00000607397 1113 ntBASIC24.17■■□□□ 1.46
RNF216Q9NWF9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
RNF216Q9NWF9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.17■■□□□ 1.46
RNF216Q9NWF9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF216Q9NWF9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF216Q9NWF9 RNF165-205ENST00000588679 2904 ntBASIC24.17■■□□□ 1.46
RNF216Q9NWF9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RNF216Q9NWF9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF216Q9NWF9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF216Q9NWF9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms