Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KLHL1Q9NR64 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
KLHL1Q9NR64 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KLHL1Q9NR64 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KLHL1Q9NR64 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.12■□□□□ 0.81
KLHL1Q9NR64 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KLHL1Q9NR64 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
KLHL1Q9NR64 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.12■□□□□ 0.81
KLHL1Q9NR64 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KLHL1Q9NR64 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KLHL1Q9NR64 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.12■□□□□ 0.81
KLHL1Q9NR64 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KLHL1Q9NR64 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
KLHL1Q9NR64 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KLHL1Q9NR64 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KLHL1Q9NR64 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
KLHL1Q9NR64 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
KLHL1Q9NR64 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KLHL1Q9NR64 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KLHL1Q9NR64 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KLHL1Q9NR64 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.11■□□□□ 0.81
KLHL1Q9NR64 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
KLHL1Q9NR64 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.11■□□□□ 0.81
KLHL1Q9NR64 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.11■□□□□ 0.81
KLHL1Q9NR64 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.11■□□□□ 0.81
KLHL1Q9NR64 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.11■□□□□ 0.81
KLHL1Q9NR64 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.11■□□□□ 0.81
KLHL1Q9NR64 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
KLHL1Q9NR64 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
KLHL1Q9NR64 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KLHL1Q9NR64 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KLHL1Q9NR64 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KLHL1Q9NR64 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.1■□□□□ 0.81
KLHL1Q9NR64 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KLHL1Q9NR64 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KLHL1Q9NR64 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KLHL1Q9NR64 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.1■□□□□ 0.81
KLHL1Q9NR64 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.1■□□□□ 0.81
KLHL1Q9NR64 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.1■□□□□ 0.81
KLHL1Q9NR64 AC022517.1-201ENST00000592429 346 ntBASIC20.1■□□□□ 0.81
KLHL1Q9NR64 IKBKGP1-201ENST00000612193 1073 ntBASIC20.1■□□□□ 0.81
KLHL1Q9NR64 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.1■□□□□ 0.81
KLHL1Q9NR64 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KLHL1Q9NR64 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.1■□□□□ 0.81
KLHL1Q9NR64 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KLHL1Q9NR64 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.1■□□□□ 0.81
KLHL1Q9NR64 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KLHL1Q9NR64 LINC02228-203ENST00000641970 1355 ntBASIC20.09■□□□□ 0.81
KLHL1Q9NR64 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KLHL1Q9NR64 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
KLHL1Q9NR64 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
KLHL1Q9NR64 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.09■□□□□ 0.81
KLHL1Q9NR64 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
KLHL1Q9NR64 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.09■□□□□ 0.81
KLHL1Q9NR64 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.09■□□□□ 0.81
KLHL1Q9NR64 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.09■□□□□ 0.81
KLHL1Q9NR64 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.09■□□□□ 0.81
KLHL1Q9NR64 KRT18P14-201ENST00000534205 1250 ntBASIC20.09■□□□□ 0.81
KLHL1Q9NR64 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
KLHL1Q9NR64 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.09■□□□□ 0.81
KLHL1Q9NR64 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.09■□□□□ 0.81
KLHL1Q9NR64 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KLHL1Q9NR64 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KLHL1Q9NR64 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
KLHL1Q9NR64 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
KLHL1Q9NR64 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
KLHL1Q9NR64 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KLHL1Q9NR64 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KLHL1Q9NR64 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KLHL1Q9NR64 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KLHL1Q9NR64 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.08■□□□□ 0.81
KLHL1Q9NR64 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
KLHL1Q9NR64 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
KLHL1Q9NR64 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.08■□□□□ 0.81
KLHL1Q9NR64 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.08■□□□□ 0.8
KLHL1Q9NR64 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
KLHL1Q9NR64 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
KLHL1Q9NR64 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
KLHL1Q9NR64 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.08■□□□□ 0.8
KLHL1Q9NR64 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
KLHL1Q9NR64 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
KLHL1Q9NR64 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL1Q9NR64 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.07■□□□□ 0.8
KLHL1Q9NR64 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL1Q9NR64 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL1Q9NR64 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL1Q9NR64 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL1Q9NR64 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL1Q9NR64 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL1Q9NR64 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL1Q9NR64 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.07■□□□□ 0.8
KLHL1Q9NR64 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.07■□□□□ 0.8
KLHL1Q9NR64 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.07■□□□□ 0.8
KLHL1Q9NR64 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL1Q9NR64 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL1Q9NR64 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL1Q9NR64 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KLHL1Q9NR64 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
KLHL1Q9NR64 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.07■□□□□ 0.8
KLHL1Q9NR64 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms