Protein–RNA interactions for Protein: Q9H159

CDH19, Cadherin-19, humanhuman

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19Q9H159 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH19Q9H159 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CDH19Q9H159 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDH19Q9H159 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH19Q9H159 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH19Q9H159 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CDH19Q9H159 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.69■■□□□ 1.06
CDH19Q9H159 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.69■■□□□ 1.06
CDH19Q9H159 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.69■■□□□ 1.06
CDH19Q9H159 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.69■■□□□ 1.06
CDH19Q9H159 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH19Q9H159 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.68■■□□□ 1.06
CDH19Q9H159 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.68■■□□□ 1.06
CDH19Q9H159 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.68■■□□□ 1.06
CDH19Q9H159 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
CDH19Q9H159 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH19Q9H159 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.68■■□□□ 1.06
CDH19Q9H159 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH19Q9H159 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
CDH19Q9H159 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH19Q9H159 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH19Q9H159 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH19Q9H159 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH19Q9H159 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDH19Q9H159 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDH19Q9H159 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH19Q9H159 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CDH19Q9H159 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.67■■□□□ 1.06
CDH19Q9H159 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.67■■□□□ 1.06
CDH19Q9H159 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH19Q9H159 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.67■■□□□ 1.06
CDH19Q9H159 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH19Q9H159 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.67■■□□□ 1.06
CDH19Q9H159 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.67■■□□□ 1.06
CDH19Q9H159 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDH19Q9H159 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH19Q9H159 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDH19Q9H159 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH19Q9H159 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH19Q9H159 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.67■■□□□ 1.06
CDH19Q9H159 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH19Q9H159 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH19Q9H159 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH19Q9H159 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH19Q9H159 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH19Q9H159 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.66■■□□□ 1.06
CDH19Q9H159 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.66■■□□□ 1.06
CDH19Q9H159 FBXW4P1-201ENST00000426721 2239 ntBASIC21.66■■□□□ 1.06
CDH19Q9H159 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.66■■□□□ 1.06
CDH19Q9H159 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.66■■□□□ 1.06
CDH19Q9H159 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.66■■□□□ 1.06
CDH19Q9H159 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.66■■□□□ 1.06
CDH19Q9H159 AC079089.2-201ENST00000531211 1277 ntBASIC21.66■■□□□ 1.06
CDH19Q9H159 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.66■■□□□ 1.06
CDH19Q9H159 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.66■■□□□ 1.06
CDH19Q9H159 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.66■■□□□ 1.06
CDH19Q9H159 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH19Q9H159 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH19Q9H159 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.66■■□□□ 1.06
CDH19Q9H159 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH19Q9H159 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH19Q9H159 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH19Q9H159 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.65■■□□□ 1.06
CDH19Q9H159 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH19Q9H159 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.65■■□□□ 1.06
CDH19Q9H159 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.65■■□□□ 1.06
CDH19Q9H159 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.65■■□□□ 1.06
CDH19Q9H159 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDH19Q9H159 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.65■■□□□ 1.06
CDH19Q9H159 MIR6821-201ENST00000617625 74 ntBASIC21.65■■□□□ 1.06
CDH19Q9H159 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.65■■□□□ 1.06
CDH19Q9H159 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.65■■□□□ 1.06
CDH19Q9H159 AL358852.1-201ENST00000623174 1268 ntBASIC21.65■■□□□ 1.06
CDH19Q9H159 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH19Q9H159 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.65■■□□□ 1.06
CDH19Q9H159 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH19Q9H159 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CDH19Q9H159 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH19Q9H159 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDH19Q9H159 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDH19Q9H159 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.64■■□□□ 1.06
CDH19Q9H159 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDH19Q9H159 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.64■■□□□ 1.06
CDH19Q9H159 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDH19Q9H159 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH19Q9H159 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.64■■□□□ 1.05
CDH19Q9H159 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH19Q9H159 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH19Q9H159 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDH19Q9H159 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH19Q9H159 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.64■■□□□ 1.05
CDH19Q9H159 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH19Q9H159 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDH19Q9H159 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.64■■□□□ 1.05
CDH19Q9H159 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.64■■□□□ 1.05
CDH19Q9H159 AL354811.1-201ENST00000610286 706 ntBASIC21.64■■□□□ 1.05
CDH19Q9H159 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.64■■□□□ 1.05
CDH19Q9H159 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.64■■□□□ 1.05
CDH19Q9H159 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CDH19Q9H159 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms