Protein–RNA interactions for Protein: Q9H089

LSG1, Large subunit GTPase 1 homolog, humanhuman

Known RBP Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1Q9H089 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
LSG1Q9H089 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
LSG1Q9H089 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
LSG1Q9H089 AC244015.2-201ENST00000616358 1861 ntBASIC25.75■■□□□ 1.71
LSG1Q9H089 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
LSG1Q9H089 AP004607.7-201ENST00000527152 1677 ntBASIC25.75■■□□□ 1.71
LSG1Q9H089 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
LSG1Q9H089 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC25.75■■□□□ 1.71
LSG1Q9H089 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC25.75■■□□□ 1.71
LSG1Q9H089 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
LSG1Q9H089 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
LSG1Q9H089 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
LSG1Q9H089 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC25.75■■□□□ 1.71
LSG1Q9H089 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC25.75■■□□□ 1.71
LSG1Q9H089 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.75■■□□□ 1.71
LSG1Q9H089 AC027682.1-201ENST00000562846 899 ntBASIC25.75■■□□□ 1.71
LSG1Q9H089 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC25.75■■□□□ 1.71
LSG1Q9H089 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
LSG1Q9H089 AC026310.3-201ENST00000625186 2373 ntBASIC25.75■■□□□ 1.71
LSG1Q9H089 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC25.75■■□□□ 1.71
LSG1Q9H089 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
LSG1Q9H089 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC25.75■■□□□ 1.71
LSG1Q9H089 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
LSG1Q9H089 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC25.74■■□□□ 1.71
LSG1Q9H089 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
LSG1Q9H089 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
LSG1Q9H089 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
LSG1Q9H089 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
LSG1Q9H089 AF213884.3-201ENST00000563833 479 ntBASIC25.74■■□□□ 1.71
LSG1Q9H089 AL355001.2-201ENST00000620617 1191 ntBASIC25.74■■□□□ 1.71
LSG1Q9H089 AL136967.2-201ENST00000623968 743 ntBASIC25.74■■□□□ 1.71
LSG1Q9H089 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
LSG1Q9H089 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC25.73■■□□□ 1.71
LSG1Q9H089 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
LSG1Q9H089 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
LSG1Q9H089 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
LSG1Q9H089 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC25.73■■□□□ 1.71
LSG1Q9H089 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC25.73■■□□□ 1.71
LSG1Q9H089 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.73■■□□□ 1.71
LSG1Q9H089 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
LSG1Q9H089 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC25.73■■□□□ 1.71
LSG1Q9H089 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
LSG1Q9H089 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
LSG1Q9H089 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
LSG1Q9H089 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
LSG1Q9H089 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
LSG1Q9H089 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
LSG1Q9H089 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
LSG1Q9H089 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
LSG1Q9H089 SUDS3P1-201ENST00000505831 966 ntBASIC25.72■■□□□ 1.71
LSG1Q9H089 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC25.72■■□□□ 1.71
LSG1Q9H089 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
LSG1Q9H089 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
LSG1Q9H089 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.71■■□□□ 1.71
LSG1Q9H089 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
LSG1Q9H089 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC25.71■■□□□ 1.71
LSG1Q9H089 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
LSG1Q9H089 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
LSG1Q9H089 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
LSG1Q9H089 AL139246.5-201ENST00000606645 996 ntBASIC25.71■■□□□ 1.71
LSG1Q9H089 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
LSG1Q9H089 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC25.71■■□□□ 1.71
LSG1Q9H089 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
LSG1Q9H089 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
LSG1Q9H089 TSPY26P-201ENST00000476365 1326 ntBASIC25.7■■□□□ 1.71
LSG1Q9H089 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
LSG1Q9H089 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.7■■□□□ 1.7
LSG1Q9H089 GRAMD4P2-201ENST00000423297 1097 ntBASIC25.7■■□□□ 1.7
LSG1Q9H089 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.7■■□□□ 1.7
LSG1Q9H089 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
LSG1Q9H089 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
LSG1Q9H089 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.7
LSG1Q9H089 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
LSG1Q9H089 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
LSG1Q9H089 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC25.7■■□□□ 1.7
LSG1Q9H089 RASA4CP-201ENST00000424092 1398 ntBASIC25.69■■□□□ 1.7
LSG1Q9H089 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
LSG1Q9H089 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
LSG1Q9H089 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC25.69■■□□□ 1.7
LSG1Q9H089 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC25.69■■□□□ 1.7
LSG1Q9H089 AL034346.1-201ENST00000568244 1277 ntBASIC25.69■■□□□ 1.7
LSG1Q9H089 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC25.69■■□□□ 1.7
LSG1Q9H089 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC25.69■■□□□ 1.7
LSG1Q9H089 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
LSG1Q9H089 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
LSG1Q9H089 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
LSG1Q9H089 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
LSG1Q9H089 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
LSG1Q9H089 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
LSG1Q9H089 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
LSG1Q9H089 ASL-203ENST00000380839 1765 ntTSL 5 BASIC25.68■■□□□ 1.7
LSG1Q9H089 TUB-203ENST00000534099 1759 ntTSL 2 BASIC25.68■■□□□ 1.7
LSG1Q9H089 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC25.68■■□□□ 1.7
LSG1Q9H089 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
LSG1Q9H089 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC25.68■■□□□ 1.7
LSG1Q9H089 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC25.68■■□□□ 1.7
LSG1Q9H089 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
LSG1Q9H089 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
LSG1Q9H089 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LSG1Q9H089 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms