Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
DUX3Q96PT4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DUX3Q96PT4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DUX3Q96PT4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.66■□□□□ 0.26
DUX3Q96PT4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.66■□□□□ 0.26
DUX3Q96PT4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.66■□□□□ 0.26
DUX3Q96PT4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.66■□□□□ 0.26
DUX3Q96PT4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.66■□□□□ 0.26
DUX3Q96PT4 RARRES2P11-201ENST00000635158 484 ntBASIC16.66■□□□□ 0.26
DUX3Q96PT4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
DUX3Q96PT4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DUX3Q96PT4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DUX3Q96PT4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
DUX3Q96PT4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DUX3Q96PT4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DUX3Q96PT4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
DUX3Q96PT4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DUX3Q96PT4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DUX3Q96PT4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DUX3Q96PT4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DUX3Q96PT4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
DUX3Q96PT4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DUX3Q96PT4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DUX3Q96PT4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DUX3Q96PT4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DUX3Q96PT4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DUX3Q96PT4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.65■□□□□ 0.26
DUX3Q96PT4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.65■□□□□ 0.26
DUX3Q96PT4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.65■□□□□ 0.26
DUX3Q96PT4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.65■□□□□ 0.26
DUX3Q96PT4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DUX3Q96PT4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
DUX3Q96PT4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DUX3Q96PT4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DUX3Q96PT4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DUX3Q96PT4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DUX3Q96PT4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DUX3Q96PT4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.65■□□□□ 0.26
DUX3Q96PT4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
DUX3Q96PT4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DUX3Q96PT4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DUX3Q96PT4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.64■□□□□ 0.25
DUX3Q96PT4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
DUX3Q96PT4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.64■□□□□ 0.25
DUX3Q96PT4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.64■□□□□ 0.25
DUX3Q96PT4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.64■□□□□ 0.25
DUX3Q96PT4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DUX3Q96PT4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DUX3Q96PT4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DUX3Q96PT4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16.63■□□□□ 0.25
DUX3Q96PT4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DUX3Q96PT4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
DUX3Q96PT4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DUX3Q96PT4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
DUX3Q96PT4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DUX3Q96PT4 AP004607.4-201ENST00000530158 1459 ntBASIC16.63■□□□□ 0.25
DUX3Q96PT4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DUX3Q96PT4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.63■□□□□ 0.25
DUX3Q96PT4 AC016769.1-201ENST00000409132 1010 ntBASIC16.63■□□□□ 0.25
DUX3Q96PT4 AC079140.4-201ENST00000507448 529 ntBASIC16.63■□□□□ 0.25
DUX3Q96PT4 AC137761.2-201ENST00000561729 223 ntBASIC16.63■□□□□ 0.25
DUX3Q96PT4 AC145350.3-201ENST00000569033 163 ntBASIC16.63■□□□□ 0.25
DUX3Q96PT4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DUX3Q96PT4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
DUX3Q96PT4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DUX3Q96PT4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DUX3Q96PT4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.63■□□□□ 0.25
DUX3Q96PT4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.63■□□□□ 0.25
DUX3Q96PT4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.63■□□□□ 0.25
DUX3Q96PT4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DUX3Q96PT4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
DUX3Q96PT4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DUX3Q96PT4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
DUX3Q96PT4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.62■□□□□ 0.25
DUX3Q96PT4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.62■□□□□ 0.25
DUX3Q96PT4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.62■□□□□ 0.25
DUX3Q96PT4 DUSP8P5-201ENST00000422884 1815 ntBASIC16.62■□□□□ 0.25
DUX3Q96PT4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.62■□□□□ 0.25
DUX3Q96PT4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.62■□□□□ 0.25
DUX3Q96PT4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.62■□□□□ 0.25
DUX3Q96PT4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
DUX3Q96PT4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.62■□□□□ 0.25
DUX3Q96PT4 AC079089.2-201ENST00000531211 1277 ntBASIC16.62■□□□□ 0.25
DUX3Q96PT4 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.62■□□□□ 0.25
DUX3Q96PT4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
DUX3Q96PT4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.62■□□□□ 0.25
DUX3Q96PT4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.62■□□□□ 0.25
DUX3Q96PT4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DUX3Q96PT4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
DUX3Q96PT4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DUX3Q96PT4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DUX3Q96PT4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DUX3Q96PT4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
DUX3Q96PT4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
DUX3Q96PT4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DUX3Q96PT4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC16.61■□□□□ 0.25
DUX3Q96PT4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DUX3Q96PT4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
DUX3Q96PT4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
DUX3Q96PT4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms