Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CFAP54Q96N23 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CFAP54Q96N23 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CFAP54Q96N23 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.31■■□□□ 1
CFAP54Q96N23 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.3■■□□□ 1
CFAP54Q96N23 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.3■■□□□ 1
CFAP54Q96N23 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.3■■□□□ 1
CFAP54Q96N23 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CFAP54Q96N23 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.3■■□□□ 1
CFAP54Q96N23 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CFAP54Q96N23 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CFAP54Q96N23 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.3■■□□□ 1
CFAP54Q96N23 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.3■■□□□ 1
CFAP54Q96N23 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.3■■□□□ 1
CFAP54Q96N23 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.3■■□□□ 1
CFAP54Q96N23 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.3■■□□□ 1
CFAP54Q96N23 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CFAP54Q96N23 AC093787.1-201ENST00000450396 207 ntBASIC21.3■■□□□ 1
CFAP54Q96N23 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CFAP54Q96N23 AL359736.2-201ENST00000621992 437 ntBASIC21.3■■□□□ 1
CFAP54Q96N23 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.29■■□□□ 1
CFAP54Q96N23 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CFAP54Q96N23 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.29■■□□□ 1
CFAP54Q96N23 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CFAP54Q96N23 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.29■■□□□ 1
CFAP54Q96N23 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CFAP54Q96N23 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.29■■□□□ 1
CFAP54Q96N23 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.29■■□□□ 1
CFAP54Q96N23 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CFAP54Q96N23 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CFAP54Q96N23 AC097658.1-201ENST00000475555 843 ntBASIC21.29■■□□□ 1
CFAP54Q96N23 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CFAP54Q96N23 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.28■■□□□ 1
CFAP54Q96N23 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.28■■□□□ 1
CFAP54Q96N23 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
CFAP54Q96N23 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CFAP54Q96N23 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
CFAP54Q96N23 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.28■■□□□ 1
CFAP54Q96N23 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CFAP54Q96N23 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CFAP54Q96N23 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CFAP54Q96N23 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CFAP54Q96N23 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CFAP54Q96N23 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CFAP54Q96N23 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CFAP54Q96N23 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.27■■□□□ 1
CFAP54Q96N23 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.27■■□□□ 1
CFAP54Q96N23 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.27■■□□□ 1
CFAP54Q96N23 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CFAP54Q96N23 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
CFAP54Q96N23 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CFAP54Q96N23 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.27■■□□□ 1
CFAP54Q96N23 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CFAP54Q96N23 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CFAP54Q96N23 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.27■□□□□ 0.99
CFAP54Q96N23 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.27■□□□□ 0.99
CFAP54Q96N23 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.27■□□□□ 0.99
CFAP54Q96N23 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.27■□□□□ 0.99
CFAP54Q96N23 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CFAP54Q96N23 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CFAP54Q96N23 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CFAP54Q96N23 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.26■□□□□ 0.99
CFAP54Q96N23 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CFAP54Q96N23 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CFAP54Q96N23 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CFAP54Q96N23 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CFAP54Q96N23 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.26■□□□□ 0.99
CFAP54Q96N23 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.26■□□□□ 0.99
CFAP54Q96N23 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CFAP54Q96N23 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.26■□□□□ 0.99
CFAP54Q96N23 FAM197Y4-202ENST00000622692 608 ntBASIC21.26■□□□□ 0.99
CFAP54Q96N23 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CFAP54Q96N23 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.26■□□□□ 0.99
CFAP54Q96N23 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.25■□□□□ 0.99
CFAP54Q96N23 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.25■□□□□ 0.99
CFAP54Q96N23 C1QBPP2-201ENST00000528754 825 ntBASIC21.25■□□□□ 0.99
CFAP54Q96N23 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.25■□□□□ 0.99
CFAP54Q96N23 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.25■□□□□ 0.99
CFAP54Q96N23 AC133561.5-201ENST00000635547 218 ntBASIC21.25■□□□□ 0.99
CFAP54Q96N23 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.25■□□□□ 0.99
CFAP54Q96N23 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CFAP54Q96N23 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CFAP54Q96N23 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.25■□□□□ 0.99
CFAP54Q96N23 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.25■□□□□ 0.99
CFAP54Q96N23 AP001160.3-201ENST00000601484 763 ntBASIC21.25■□□□□ 0.99
CFAP54Q96N23 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.25■□□□□ 0.99
CFAP54Q96N23 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.25■□□□□ 0.99
CFAP54Q96N23 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.25■□□□□ 0.99
CFAP54Q96N23 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CFAP54Q96N23 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CFAP54Q96N23 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.25■□□□□ 0.99
CFAP54Q96N23 AC008403.3-201ENST00000598924 454 ntBASIC21.25■□□□□ 0.99
CFAP54Q96N23 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CFAP54Q96N23 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.24■□□□□ 0.99
CFAP54Q96N23 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.24■□□□□ 0.99
CFAP54Q96N23 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.24■□□□□ 0.99
CFAP54Q96N23 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CFAP54Q96N23 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CFAP54Q96N23 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.24■□□□□ 0.99
CFAP54Q96N23 RPPH1-201ENST00000516869 333 ntBASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms