Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.8■□□□□ 0.6
RPS4Y2Q8TD47 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPS4Y2Q8TD47 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPS4Y2Q8TD47 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPS4Y2Q8TD47 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RPS4Y2Q8TD47 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.79■□□□□ 0.6
RPS4Y2Q8TD47 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4Y2Q8TD47 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4Y2Q8TD47 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.79■□□□□ 0.6
RPS4Y2Q8TD47 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4Y2Q8TD47 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4Y2Q8TD47 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.79■□□□□ 0.6
RPS4Y2Q8TD47 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.79■□□□□ 0.6
RPS4Y2Q8TD47 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4Y2Q8TD47 GUSBP5-201ENST00000418136 578 ntBASIC18.79■□□□□ 0.6
RPS4Y2Q8TD47 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4Y2Q8TD47 MIR4787-201ENST00000607364 84 ntBASIC18.79■□□□□ 0.6
RPS4Y2Q8TD47 AC010997.5-201ENST00000609182 354 ntBASIC18.79■□□□□ 0.6
RPS4Y2Q8TD47 AC241377.3-202ENST00000626088 1088 ntBASIC18.79■□□□□ 0.6
RPS4Y2Q8TD47 AC241585.3-202ENST00000628937 1088 ntBASIC18.79■□□□□ 0.6
RPS4Y2Q8TD47 AC245100.8-202ENST00000629247 1058 ntBASIC18.79■□□□□ 0.6
RPS4Y2Q8TD47 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
RPS4Y2Q8TD47 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4Y2Q8TD47 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4Y2Q8TD47 AC133637.1-201ENST00000624115 1537 ntBASIC18.79■□□□□ 0.6
RPS4Y2Q8TD47 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4Y2Q8TD47 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4Y2Q8TD47 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4Y2Q8TD47 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4Y2Q8TD47 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4Y2Q8TD47 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4Y2Q8TD47 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4Y2Q8TD47 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4Y2Q8TD47 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4Y2Q8TD47 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4Y2Q8TD47 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.78■□□□□ 0.6
RPS4Y2Q8TD47 OXCT2P1-201ENST00000447263 1535 ntBASIC18.78■□□□□ 0.6
RPS4Y2Q8TD47 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4Y2Q8TD47 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4Y2Q8TD47 PKD1P6-201ENST00000343738 4769 ntBASIC18.78■□□□□ 0.6
RPS4Y2Q8TD47 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RPS4Y2Q8TD47 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RPS4Y2Q8TD47 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS4Y2Q8TD47 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS4Y2Q8TD47 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS4Y2Q8TD47 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS4Y2Q8TD47 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.77■□□□□ 0.6
RPS4Y2Q8TD47 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RPS4Y2Q8TD47 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RPS4Y2Q8TD47 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RPS4Y2Q8TD47 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RPS4Y2Q8TD47 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
RPS4Y2Q8TD47 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4Y2Q8TD47 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4Y2Q8TD47 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4Y2Q8TD47 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4Y2Q8TD47 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4Y2Q8TD47 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.76■□□□□ 0.59
RPS4Y2Q8TD47 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
RPS4Y2Q8TD47 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4Y2Q8TD47 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.76■□□□□ 0.59
RPS4Y2Q8TD47 AC068587.7-201ENST00000641602 218 ntBASIC18.76■□□□□ 0.59
RPS4Y2Q8TD47 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4Y2Q8TD47 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.76■□□□□ 0.59
RPS4Y2Q8TD47 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4Y2Q8TD47 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.76■□□□□ 0.59
RPS4Y2Q8TD47 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RPS4Y2Q8TD47 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.76■□□□□ 0.59
RPS4Y2Q8TD47 AL157384.1-201ENST00000445995 2473 ntBASIC18.76■□□□□ 0.59
RPS4Y2Q8TD47 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4Y2Q8TD47 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.76■□□□□ 0.59
RPS4Y2Q8TD47 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS4Y2Q8TD47 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS4Y2Q8TD47 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS4Y2Q8TD47 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS4Y2Q8TD47 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS4Y2Q8TD47 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RPS4Y2Q8TD47 AL117332.1-201ENST00000622628 974 ntBASIC18.75■□□□□ 0.59
RPS4Y2Q8TD47 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RPS4Y2Q8TD47 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.75■□□□□ 0.59
RPS4Y2Q8TD47 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS4Y2Q8TD47 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RPS4Y2Q8TD47 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS4Y2Q8TD47 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RPS4Y2Q8TD47 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RPS4Y2Q8TD47 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS4Y2Q8TD47 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4Y2Q8TD47 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RPS4Y2Q8TD47 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.74■□□□□ 0.59
RPS4Y2Q8TD47 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RPS4Y2Q8TD47 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.74■□□□□ 0.59
RPS4Y2Q8TD47 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4Y2Q8TD47 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4Y2Q8TD47 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4Y2Q8TD47 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4Y2Q8TD47 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4Y2Q8TD47 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4Y2Q8TD47 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RPS4Y2Q8TD47 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4Y2Q8TD47 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms