Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDND2Q8NHS1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDND2Q8NHS1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CLDND2Q8NHS1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CLDND2Q8NHS1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDND2Q8NHS1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CLDND2Q8NHS1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.22■□□□□ 0.51
CLDND2Q8NHS1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
CLDND2Q8NHS1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDND2Q8NHS1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDND2Q8NHS1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDND2Q8NHS1 ECEL1P1-201ENST00000373592 1742 ntBASIC18.21■□□□□ 0.51
CLDND2Q8NHS1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDND2Q8NHS1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CLDND2Q8NHS1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDND2Q8NHS1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLDND2Q8NHS1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDND2Q8NHS1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDND2Q8NHS1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDND2Q8NHS1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDND2Q8NHS1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CLDND2Q8NHS1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.21■□□□□ 0.51
CLDND2Q8NHS1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDND2Q8NHS1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDND2Q8NHS1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDND2Q8NHS1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.21■□□□□ 0.51
CLDND2Q8NHS1 RARRES2P11-201ENST00000635158 484 ntBASIC18.21■□□□□ 0.51
CLDND2Q8NHS1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDND2Q8NHS1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLDND2Q8NHS1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.21■□□□□ 0.51
CLDND2Q8NHS1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.21■□□□□ 0.5
CLDND2Q8NHS1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CLDND2Q8NHS1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDND2Q8NHS1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDND2Q8NHS1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.2■□□□□ 0.5
CLDND2Q8NHS1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDND2Q8NHS1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDND2Q8NHS1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.2■□□□□ 0.5
CLDND2Q8NHS1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.2■□□□□ 0.5
CLDND2Q8NHS1 TPRG1LP1-201ENST00000598702 760 ntBASIC18.2■□□□□ 0.5
CLDND2Q8NHS1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CLDND2Q8NHS1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.2■□□□□ 0.5
CLDND2Q8NHS1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDND2Q8NHS1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDND2Q8NHS1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDND2Q8NHS1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDND2Q8NHS1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDND2Q8NHS1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDND2Q8NHS1 BX005040.4-201ENST00000637145 1518 ntBASIC18.19■□□□□ 0.5
CLDND2Q8NHS1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CLDND2Q8NHS1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDND2Q8NHS1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDND2Q8NHS1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDND2Q8NHS1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDND2Q8NHS1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDND2Q8NHS1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDND2Q8NHS1 AC004911.1-201ENST00000416316 871 ntBASIC18.19■□□□□ 0.5
CLDND2Q8NHS1 AC090192.1-201ENST00000517740 490 ntBASIC18.19■□□□□ 0.5
CLDND2Q8NHS1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
CLDND2Q8NHS1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.19■□□□□ 0.5
CLDND2Q8NHS1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CLDND2Q8NHS1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDND2Q8NHS1 ANOS2P-203ENST00000472227 1816 ntBASIC18.19■□□□□ 0.5
CLDND2Q8NHS1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.18■□□□□ 0.5
CLDND2Q8NHS1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDND2Q8NHS1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDND2Q8NHS1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.18■□□□□ 0.5
CLDND2Q8NHS1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CLDND2Q8NHS1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDND2Q8NHS1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDND2Q8NHS1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.18■□□□□ 0.5
CLDND2Q8NHS1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDND2Q8NHS1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDND2Q8NHS1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
CLDND2Q8NHS1 SMUG1P1-201ENST00000590640 811 ntBASIC18.18■□□□□ 0.5
CLDND2Q8NHS1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.18■□□□□ 0.5
CLDND2Q8NHS1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDND2Q8NHS1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.18■□□□□ 0.5
CLDND2Q8NHS1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CLDND2Q8NHS1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDND2Q8NHS1 OXCT2P1-201ENST00000447263 1535 ntBASIC18.18■□□□□ 0.5
CLDND2Q8NHS1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDND2Q8NHS1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CLDND2Q8NHS1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDND2Q8NHS1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
CLDND2Q8NHS1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDND2Q8NHS1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDND2Q8NHS1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDND2Q8NHS1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.17■□□□□ 0.5
CLDND2Q8NHS1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDND2Q8NHS1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDND2Q8NHS1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDND2Q8NHS1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CLDND2Q8NHS1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDND2Q8NHS1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CLDND2Q8NHS1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.17■□□□□ 0.5
CLDND2Q8NHS1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDND2Q8NHS1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDND2Q8NHS1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDND2Q8NHS1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms